Name : CKC_05620 (CKC_05620) Accession : YP_004063357.1 Strain : Candidatus Liberibacter solanacearum CLso-ZC1 Genome accession: NC_014774 Putative virulence/resistance : Virulence Product : ABC transporter membrane spanning protein (iron) Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 1197699 - 1198544 bp Length : 846 bp Strand : + Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components DNA sequence : ATGGTTACTTATGCAACACAATACCCTCTTTTTGATCTTCTTCTAGAGCCTTTTACATACAATTATATGACTACAGCTAT TTGGATTAGCATGGTAATAGGATGCGTCTGTGGACTCTTATCATCATATTTAATATTGAAAGGTTGGTCTTCCATTGGAA ATGGAATTTCACATGCAATTTTCCTTGGAATAGTTGGTTGCTACAAATTAGGGATTCCCATGTCTATTGGCGCTACTGTG TCAGGAATGTTGGCAACTAGCTTAATGATAAAAATAAAAGAAAAAACGAAATTACGGGAAGATGTATCCATAGCTGTGGT TTATCTCATATTCTATTCCTTTGCTATGTTCTTTTTATCACTATCACCAAACGATGTTTATATAGAAAGTGTCTTTCTAG GAAATGTCCTGTTTCTGAGTAAAGCCGATATCTTACAAGTCTTGTTTATAGCTTTCTTAGTTTTATCCATCGTATTAATA AAACGGAAAGATTTTATTCTTTTGTTCTTCGATGAAGCGCATGCTCATTCCATAGGAATGAATGTAAAATTTTTAAAAAA TCTATTTTTTGCTTTACTAACCATCACAGTAGTTGTTGGCCTCCAAACAGTTGGTCTATTACTTGTCATAGCAACAGTTA TAACGCCTGGTGCTACTGCTAGATTGTTGACTAAATCCTTTGGATCATATCTTTTTCTAAGCTCTTTCTTAGGCGCAGCC AGTGGCTTCTTTGGTGCGTATACAAGTTATTTTCTAGACTGTGGACCAGGAGGAATGATTGTCTTAATAGAAACTGCTTT GTTTTTACTATCGCTACTCTATTTTAAACAATGTAAGACACGATAG Protein sequence : MVTYATQYPLFDLLLEPFTYNYMTTAIWISMVIGCVCGLLSSYLILKGWSSIGNGISHAIFLGIVGCYKLGIPMSIGATV SGMLATSLMIKIKEKTKLREDVSIAVVYLIFYSFAMFFLSLSPNDVYIESVFLGNVLFLSKADILQVLFIAFLVLSIVLI KRKDFILLFFDEAHAHSIGMNVKFLKNLFFALLTITVVVGLQTVGLLLVIATVITPGATARLLTKSFGSYLFLSSFLGAA SGFFGAYTSYFLDCGPGGMIVLIETALFLLSLLYFKQCKTR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 3e-41 | 46 |
sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 2e-41 | 46 |
sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 3e-41 | 46 |
sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 3e-41 | 46 |
sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 3e-41 | 46 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
CKC_05620 | YP_004063357.1 | ABC transporter membrane spanning protein (iron) | BAC0351 | Protein | 1e-41 | 46 |
CKC_05620 | YP_004063357.1 | ABC transporter membrane spanning protein (iron) | BAC0441 | Protein | 4e-38 | 45 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
CKC_05620 | YP_004063357.1 | ABC transporter membrane spanning protein (iron) | VFG0527 | Protein | 1e-41 | 46 |