Gene Information

Name : CKC_05165 (CKC_05165)
Accession : YP_004063267.1
Strain : Candidatus Liberibacter solanacearum CLso-ZC1
Genome accession: NC_014774
Putative virulence/resistance : Unknown
Product : S-adenosylmethionine:tRNA ribosyltransferase-isomerase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0809
EC number : -
Position : 1102891 - 1103970 bp
Length : 1080 bp
Strand : -
Note : COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)

DNA sequence :
ATGATGGTGAAAGAATTTGATTTTCATCTTCCATCTTCTAGAATTGCATTAAGGCCTGTATCTCCGAGAGATAGCGCTCG
TCTCATGGTTGTATATCCAAATTTATCATGTTCTCAAATGATTTCAGATTATTCAGTGCGTGATTTACCTATTTTTTTAA
ATTCTAATGATGCCATTGTATTTAACAATACTAAAGTTATTGCGGCACAATTAAGAGGAAGACGATTGCGTCGTACAAAT
GATAGCGAACATTGGATATCTTGTACTTTGCATATGCGTATTTCTTCTAATAGTTGGAGTGCTTATGTTCGTCCAGGTAA
AATTATTAGACAAGGAGATACAATCTATTTTTTTTCGCAAGATGGTCAATCTAAATTAGAGGCGAATGTTATAGAAAAGA
GAGATACAGGAGAAATTCTGCTGGTTTTCCCTCTTTCAGGGACGGAATTAGATAGACAAATTGCTTTGATAGGAACTATG
CCGCTACCACCTTATATTGCAAAAAAACGTCCTATAGATGAACGTGATTATGTCGATTATCAAACGACATATGCTAGCAT
TCAAGGTTCAGTTGCAGCTCCTACAGCTGGACTGCACTTTACATCTGATCTTTTGTCGAAGCTTGTTTCTATGGGTGTTG
CAGTATATTTTATAACTCTACATGTTGGTGCAGGAACTTTTATGCCAGTTAGAGTAGAAGATACTGATGATCATATTATG
CATAGTGAAATAGGTTTTATAGATGCGCAAACAGCACAAGATTTAAATGCTGTTAAATTGCGAGGAGGGCGTATCGTTGC
CGTTGGAACTACATCATTGCGTCTTTTAGAAACAGCAACAACAGAAGATGGAATCATAATGCCATTATCAGGGTATACTA
ATATTTTTATAACTCCAGGATATCGTTTCCGTGCTGTTGATGTATTGCTGAGTAATTTTCATTTACCAAAATCAACTTTA
TTAATGTTGGTATCGGCATTTTGTGGAGTGGAAGAAACAAAAACAATGTATCAACATGCTATTGCCAATTCGTATCGTTT
TTATTCGTACGGTGATGCAAGTTTGATTTTTAAAAAATAA

Protein sequence :
MMVKEFDFHLPSSRIALRPVSPRDSARLMVVYPNLSCSQMISDYSVRDLPIFLNSNDAIVFNNTKVIAAQLRGRRLRRTN
DSEHWISCTLHMRISSNSWSAYVRPGKIIRQGDTIYFFSQDGQSKLEANVIEKRDTGEILLVFPLSGTELDRQIALIGTM
PLPPYIAKKRPIDERDYVDYQTTYASIQGSVAAPTAGLHFTSDLLSKLVSMGVAVYFITLHVGAGTFMPVRVEDTDDHIM
HSEIGFIDAQTAQDLNAVKLRGGRIVAVGTTSLRLLETATTEDGIIMPLSGYTNIFITPGYRFRAVDVLLSNFHLPKSTL
LMLVSAFCGVEETKTMYQHAIANSYRFYSYGDASLIFKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
queA AAF71483.1 QueA Not tested Hrp PAI Protein 2e-52 43
queA AAT96122.1 QueA Not tested T-PAI Protein 1e-53 43
queA AAF71490.1 QueA Not tested Hrp PAI Protein 5e-49 43
queA AAT96182.1 QueA Not tested T-PAI Protein 2e-49 43
queA AAT96106.1 QueA Not tested T-PAI Protein 1e-50 43
queA AAT96070.1 QueA Not tested T-PAI Protein 6e-51 43
queA AAT96042.1 QueA Not tested T-PAI Protein 6e-51 43