Gene Information

Name : CKC_04935 (CKC_04935)
Accession : YP_004063224.1
Strain : Candidatus Liberibacter solanacearum CLso-ZC1
Genome accession: NC_014774
Putative virulence/resistance : Virulence
Product : polysialic acid capsule expression protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 1049083 - 1050054 bp
Length : 972 bp
Strand : -
Note : COG0794 Predicted sugar phosphate isomerase involved in capsule formation

DNA sequence : 
ATGAGTAATTTAGCTATTCAATCTGCTCTGCAAAGTATTGAAATAGAGAAAAAGGGTTTGAGTTCTTTAGAATCATCTTT
ACTAGGAGAATTATCTTCTCATTTTAGTCGTGCTGTAGAAAAAATTAAGGCTATTAGAGGTCGTGTGGTTGTTACTGGAA
TTGGTAAAAGCGGTCATATTGGTTCGAAATTAGCTTCTACATTTGCTTCTACGGGAACGCCTTCATTCTTTGTACATGCT
GCTGAGGCTAATCATGGTGATCTTGGCATGATTACGCAAGATGATGTGATTATTGCCCTATCGTGGAGTGGAGAAAGCAA
TGAACTTAAGGCTATTTTATGTCATGCTCGTCGGTTTTCTATTCCGTTAATTGCTATTACTTCGGAAAACAAATCGATTG
TAGCTTGTCATGCAGATATTGTACTTAAATTACCAAAAGAACCAGAAGCTTGTCCTTATGGCTTAGCTCCGACGACTTCT
ACTATCATGCAATTAGCAATAGGAGATGCCTTAGCTATGGCGCTTATGGAAGCAGAAAATTTTACAGAAAATGATTTTTA
TGCTTTGCATCCAGGTGGGAAATTAGGATCATTGTTTACTTGTGCTACAGACGTCATGCATACTGGTACACGGCTTCCCC
TTGTAAAGATGGGTTCATTATTAATAGATGCTATTCCAGTACTTTCGGAAAAAAGATTTGGGTGTATTGCGGTTGTTGAT
GAAGATCAAAGATTAAAAGGAATTGTAACAGAAGGAGATATATTTAGAAATTTTAGAAAGAATCTCAATGTGTTAACTGT
TGAAGATATTATGACGAAAAATCCTAAGGTTATTTCGGAAGATACTCTCCTAACGGTATCTATGCAGTTTTTAAAACAGC
ATAATATTTCTGTTCTTATGGTTGTGGATGCTAATCAAAAGATAATAGGTATTGTCCATTTTTTAGATTTGCTGAGATTT
GGTATTGCCTAA

Protein sequence : 
MSNLAIQSALQSIEIEKKGLSSLESSLLGELSSHFSRAVEKIKAIRGRVVVTGIGKSGHIGSKLASTFASTGTPSFFVHA
AEANHGDLGMITQDDVIIALSWSGESNELKAILCHARRFSIPLIAITSENKSIVACHADIVLKLPKEPEACPYGLAPTTS
TIMQLAIGDALAMALMEAENFTENDFYALHPGGKLGSLFTCATDVMHTGTRLPLVKMGSLLIDAIPVLSEKRFGCIAVVD
EDQRLKGIVTEGDIFRNFRKNLNVLTVEDIMTKNPKVISEDTLLTVSMQFLKQHNISVLMVVDANQKIIGIVHFLDLLRF
GIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-44 41
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 4e-44 41