|
Name : Sulku_1224 (Sulku_1224) Accession : YP_004060087.1 Strain : Sulfuricurvum kujiense DSM 16994 Genome accession: NC_014762 Putative virulence/resistance : Virulence Product : type II secretion system protein e (gspe) Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1233405 - 1234919 bp Length : 1515 bp Strand : + Note : COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR003593; KEGG: sun:SUN_0031 type II secretion system protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Type II se DNA sequence : ATGATCTCACTTCCACTGCTGGACGAAAAACACTTAGAATTTGCGGTTCCCGAGGGTGTGGATACCTCACTGTCAATCCG CTATTCGCTTCTGTTTGGCCGTTACGAGGGGGAAGTCTATGCGATTATCCCCGAAGCCGAGCAGACAAAAGCGCTGCAGC TGTACAACAAACTCGGTCTGATCTATCCATTGGCACGTTTGTCCCGGGAAGGGTATGACAACCTCTATTTGAAATTTTTG GAATTGCGTACCGATATGGAAATATCCAAACGCCCTATGGAGACGAATGAGTTTATAGACGAAGAGCTTTCCCTGGTCGA TTTTATCAAAAATTCGGCCGACCTGCTGACCAGCGAAGAATCGGCTCCGATCATCAAATTCGTCAATACCATCTTTTATC AGGCGATCAAGCGCAAAGCAAGTGATATCCATATCGAAACCCATGAGAAAAAAGGGGAGGTCCGTTTCCGGATAGACGGA GCGCTCATCAAACACATCGATCTGGATAAGAACGTTATCGATCTGATCATCAGTCGCATAAAAGTGATCTCTGCGTTGGA TATCTCCGAAAAACGGCTTCCGCAGGACGGGAGAACGCAGGTAAAAGTTGCGGGGAAAAATCTCGATATCCGTGTTTCGG TACTCCCCACGTATCACGGTGAGAGGGTGGTATTGCGGCTGTTGATGAATTCCGCATCGATTCCGACGCTTCGGGAACTC GGTTTTGACGAAACGACCACCTCACAGTTTGAAGATCTGCTCAAATTTTCCCACGGGATCATTTTGGTAACGGGGCCGAC GGGGAGCGGTAAATCGACGACCCTCCACTCATTTTTGCAGCAGCTGGCCAGTCCGGAGAAAAATATCCTCTCCATTGAAG ACCCGGTCGAATACGATGCCCCCCATGTGAGCCAGATCGCCGTCAATACCAAAGCAGGATTGACGTTTGCGAGCGGGCTT CGCTCTATATTGCGTCAAGACCCCGATATTATCATGGTGGGGGAGATCCGTGACGCCGAAACGGCACACATTGCGATTCA GGCAGCTATGACCGGACATTTAGTTCTTTCCACACTGCATACGAACAATGCAACGGCGGCGTTTTCCAGATTGGCGGATA TGGGAGTAGACAAATTCCTGATCAGTTCCACCCTCCTTGGGGTACTGGCGCAGAGGCTGGTACGACGCTTATGCCCCTCA TGCAAAGAGCGTGTGCCGCTTGCCGATCATGATGCGGATGAACTGGGGATTGAACACGGTTTGAGCGTCGCCAGAGCCTC AGGGTGTGCCGACTGCCACCATACCGGATATCGGGGGCGCATTGCCATCGGAGAGTTTTTTATGGTGGATGACGGGGTTC GGAATTTGTTCAAAAATATTGACAGCGATTTTGAAATCCGAGAAGCGATGAAACAAAGCGGAATGAAAGTGATCGGCAAC CAGCTCATAGCATTGCTGAAAGAGCATACCACCAGTCTGGACGAGATTATCCGTGTCGGGGTCAAAGAGGCCTAA Protein sequence : MISLPLLDEKHLEFAVPEGVDTSLSIRYSLLFGRYEGEVYAIIPEAEQTKALQLYNKLGLIYPLARLSREGYDNLYLKFL ELRTDMEISKRPMETNEFIDEELSLVDFIKNSADLLTSEESAPIIKFVNTIFYQAIKRKASDIHIETHEKKGEVRFRIDG ALIKHIDLDKNVIDLIISRIKVISALDISEKRLPQDGRTQVKVAGKNLDIRVSVLPTYHGERVVLRLLMNSASIPTLREL GFDETTTSQFEDLLKFSHGIILVTGPTGSGKSTTLHSFLQQLASPEKNILSIEDPVEYDAPHVSQIAVNTKAGLTFASGL RSILRQDPDIIMVGEIRDAETAHIAIQAAMTGHLVLSTLHTNNATAAFSRLADMGVDKFLISSTLLGVLAQRLVRRLCPS CKERVPLADHDADELGIEHGLSVARASGCADCHHTGYRGRIAIGEFFMVDDGVRNLFKNIDSDFEIREAMKQSGMKVIGN QLIALLKEHTTSLDEIIRVGVKEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-93 | 50 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-93 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sulku_1224 | YP_004060087.1 | type II secretion system protein e (gspe) | VFG2048 | Protein | 1e-94 | 49 |
| Sulku_1224 | YP_004060087.1 | type II secretion system protein e (gspe) | VFG0182 | Protein | 8e-93 | 49 |
| Sulku_1224 | YP_004060087.1 | type II secretion system protein e (gspe) | VFG2426 | Protein | 1e-69 | 45 |
| Sulku_1224 | YP_004060087.1 | type II secretion system protein e (gspe) | VFG1876 | Protein | 1e-90 | 43 |
| Sulku_1224 | YP_004060087.1 | type II secretion system protein e (gspe) | VFG0112 | Protein | 1e-65 | 41 |
