Gene Information

Name : Ocepr_0395 (Ocepr_0395)
Accession : YP_004057028.1
Strain : Oceanithermus profundus DSM 14977
Genome accession: NC_014761
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 390649 - 391425 bp
Length : 777 bp
Strand : +
Note : COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439: IPR017871: IPR003593; KEGG: tth:TTC0392 iron(III) dicitrate transport ATP-binding protein FecE; PFAM: ABC transporter related; SMART: AAA ATPase; S

DNA sequence : 
GTGCTTGAGGCGCGGGGCCTGCACTTCGGCTACCCGCAGGGGCCGCGGGTGCTGGCGGGGGTGGAGCTGCGGCTCGAGCC
CGGAACCTGGCTCGCGGTGCTGGGGCCCAACGGATCGGGCAAGACGACGCTGCTTGCGCTGCTGCTGGGCCTGCTGCGCC
CCAGCGCCGGCGAGGTCCGCCTGGACGGGCGCGCCCTGCACGCCTGGAGCGCGGCCGCGCGCGGCCGCCGGATCGCCTAC
CTTCCCCAAAACGGCCCCTACCCGCCGGGGCTCACCGCCGAGGAGGTGGTCCGCCTCGGCCGCCTGCCCCACCTGGGGTT
GTGGAGCCGCGAGGGCCCGGAGGACGAGGCCGCGGTGGCCTGGGCCATGCGGGTCACGGAAACGGCCGCGCTGGCGGACC
GGCCCCTGGCCGCCCTCTCCGGAGGGGAGCGGCAGCGGGTCTTGCTCGCCCGGGCCCTGGCGCAGCGCCCCCGCTACCTG
CTCCTCGACGAACCCACCAACCACCTCGACCTGCACCACCAGGCGGCCCTGCTCAGGTTGCTGGGGCGGCTCGCCGCCGA
GGGCATCGGGGTCGCGAGCGTCTTTCACGACCCCAACCACGCGCTCGCGGCGCGCCGGGCGGTGCTGCTCGAGGGCGGCC
GGGTCGCCGACGCCGGAACCCCGGAGCAGGTGATCACGGGGGCGGCGTTCCGCCGGGTGTACGCGGGGGACGTCCGCGTC
CTGCGCGGCGAGGGCCGGGTGGCGGTGCTGCCGCGCTGGGCGGAGGTGGAGGAATGA

Protein sequence : 
MLEARGLHFGYPQGPRVLAGVELRLEPGTWLAVLGPNGSGKTTLLALLLGLLRPSAGEVRLDGRALHAWSAAARGRRIAY
LPQNGPYPPGLTAEEVVRLGRLPHLGLWSREGPEDEAAVAWAMRVTETAALADRPLAALSGGERQRVLLARALAQRPRYL
LLDEPTNHLDLHHQAALLRLLGRLAAEGIGVASVFHDPNHALAARRAVLLEGGRVADAGTPEQVITGAAFRRVYAGDVRV
LRGEGRVAVLPRWAEVEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ocepr_0395 YP_004057028.1 ABC transporter BAC0164 Protein 1e-24 42
Ocepr_0395 YP_004057028.1 ABC transporter NC_008702.1.4606598. Protein 8e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ocepr_0395 YP_004057028.1 ABC transporter VFG1042 Protein 1e-24 42