Gene Information

Name : Ocepr_0201 (Ocepr_0201)
Accession : YP_004056837.1
Strain : Oceanithermus profundus DSM 14977
Genome accession: NC_014761
Putative virulence/resistance : Unknown
Product : primary replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 195149 - 196507 bp
Length : 1359 bp
Strand : +
Note : COGs: COG0305 Replicative DNA helicase; InterPro IPR007693: IPR007694: IPR007692: IPR003593; KEGG: msv:Mesil_3095 replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; SPTR: Replicative DNA helicase; TIGRFAM: repl

DNA sequence :
ATGGCCGAACCGGCGAGAAGCCTGCCCACGGGGCGTATCCCCCCTCACAACCTGGAAGCCGAGGCCAGCGTGCTGGGCTC
GGCCCTCGTGGACAACGAGGCCATCGACCGCATCGAAGGCTTGATCACGCCCGACGTCTTCTACAAGGAGGCTCACCGCA
AGATCTGGCGGGCCATGGAGGCGTTGCGCACCCGTAGCGAGCCGGTGGACCTGGTCACCCTCTCGGAAGAACTCAAGAAG
GCGGGCGAGCTCGACGAGGTGGGCGGCCTCACCTACCTGGTGGGGCTCAGCGAGGCCACCCCCACCGCCGCCTACGCCGA
GCACTACGCCCGCATTGTCGCCGAGAAGGCGGTGCTGCGGCGCCTCATCGCCGCCGCCGGCGAGGTGATGCGGCTGGCCT
ACGACGAGGCCGGCAGCGTGGAGGAGATCGTCGACCAGGCGGGCAAGCTCATCCTCGACGTGGCCACCCACGGCCCCCGG
CACGACTTTCAGGAGATGCGCGAACTCGTCACCGAGGCCCACGAGCGCATCGCCCGGCTGCGCGAGCACGGGGCCGCCGG
CGACATGCTAGCCACCGGGTTCGCCGACCTGGACCGCATGATCGGCGGGCTGGGCCCCGGCAGCCTCAACATCATCGCCG
CCCGCCCCTCGATGGGCAAGACGGCCTTCGCGCTCACCATCGCCCAGAACGTGGCCCTGCGCGACGGCACCCCGGTGGCG
CTCTTCTCCCTGGAGATGCCCGCGATCGACCTGGTGCTGCGCATGCTCTCGAGCGAGGCGCGGGTGGACATGAACCGCAT
CCGTCAGGCGCAGCTCTCCGACCGCGACTACGAGCGGCTCGTCACCGCCGCGGGCCGAATCTACGAGGCGCCGGTCTTCA
TCGACGACACCCCGGGCCTCACCCTGATGGAGCTGCGGGCGCGGGCGCGCCGGCTCGCGGTGCACCACAAGGTGGGCCTG
ATCGTCATCGACTACATGCAGCTGATGAGCGGCGGCCAGTCCACCCGCAGCGGCGAGAACCGCCAGCAGGAGATCGCCGC
GATCAGCCGCGGCCTCAAGGGCCTGGCGCGCGAGCTGGAGGTGCCGGTGGTGGCCCTCAGCCAGCTCAGCCGCGCGGTGG
AGAGCCGCCCCAACAAGCGCCCCATGCTCAGCGACCTGCGCGAGTCGGGCTCGATCGAGCAGGACGCCGACCTGGTTCTC
TTCATCTACCGCGACGACTACTACAACGAGCACTCCGAGAAGGCGGGCATCGCCGAGATCATCATCGGCAAGCAGCGCAA
CGGTCCGGTGGGCACGGTCGAGCTGCAGTTTCACGCCGCCCACGTGCGCTTCAACGACCTAGCGCACGGGGACTTCTAG

Protein sequence :
MAEPARSLPTGRIPPHNLEAEASVLGSALVDNEAIDRIEGLITPDVFYKEAHRKIWRAMEALRTRSEPVDLVTLSEELKK
AGELDEVGGLTYLVGLSEATPTAAYAEHYARIVAEKAVLRRLIAAAGEVMRLAYDEAGSVEEIVDQAGKLILDVATHGPR
HDFQEMRELVTEAHERIARLREHGAAGDMLATGFADLDRMIGGLGPGSLNIIAARPSMGKTAFALTIAQNVALRDGTPVA
LFSLEMPAIDLVLRMLSSEARVDMNRIRQAQLSDRDYERLVTAAGRIYEAPVFIDDTPGLTLMELRARARRLAVHHKVGL
IVIDYMQLMSGGQSTRSGENRQQEIAAISRGLKGLARELEVPVVALSQLSRAVESRPNKRPMLSDLRESGSIEQDADLVL
FIYRDDYYNEHSEKAGIAEIIIGKQRNGPVGTVELQFHAAHVRFNDLAHGDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 3e-76 44
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 7e-72 42
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 6e-66 41
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 6e-66 41