Gene Information

Name : Ocepr_1908 (Ocepr_1908)
Accession : YP_004058533.1
Strain : Oceanithermus profundus DSM 14977
Genome accession: NC_014761
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1933460 - 1934122 bp
Length : 663 bp
Strand : -
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: ttr:Tter_2094 two component transcriptional regulator, winged helix family; PFAM: response regulator re

DNA sequence : 
ATGCCTGAACGGGTGCTCGTGGTGGACGACGACCCCAACCTGCTGCGCCTGGTGGAGGCCAACCTGCGGGCCCGCGGCTA
CGCGGTGGACACGGCCGCGAGCGGGGAGGCGGCGCTCGAGCGGCTGCGCATGGCCGGCTACGCCTGCGTGCTGCTCGATC
TGATGCTTCCGGGCGTGGACGGGATGACCGTGATCCGCGAGGCGCGGGGTTTCTGCGACGTGCCCATCGTGGTCATGAGC
GCACTCGGCGAAGAGGAGCGCAAGGTCGAGGCTCTCGACCTCGGGGCCGACGACTACCTGGTCAAGCCCTTCGGCGTGGC
CGAACTGCTGGCGCGGGTGCGCGCGGCGATCCGGCGCTACGGGGTTCTGGGGCCTGCGGAGGGGTTGCGGGCGGGGGTGC
TCGAGCTCGACCCCGGCGGCGGCTACGCCCTCGTCGCGGGCCGGCGGGTGCGGCTCACCCCCATGGAGTACGCGCTCTTG
CGTCAGTTCGTGCTCGCCCGCGGACGGACGCTCACCCACGAGGAGCTGCTCGACGCGGTCTGGGGGCGCGGCGCCGGCGA
GGACCACTACCTGCACGTCTACGTGGGCCGCCTGCGGCGCAAGCTGGGCCCCTCCGTGGCCATCGAGAGCCTTCCCGGCG
TCGGGTACCGCCTCGACGTTTAG

Protein sequence : 
MPERVLVVDDDPNLLRLVEANLRARGYAVDTAASGEAALERLRMAGYACVLLDLMLPGVDGMTVIREARGFCDVPIVVMS
ALGEEERKVEALDLGADDYLVKPFGVAELLARVRAAIRRYGVLGPAEGLRAGVLELDPGGGYALVAGRRVRLTPMEYALL
RQFVLARGRTLTHEELLDAVWGRGAGEDHYLHVYVGRLRRKLGPSVAIESLPGVGYRLDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 4e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ocepr_1908 YP_004058533.1 winged helix family two component transcriptional regulator AF310956.2.orf0.gene Protein 2e-31 41