Gene Information

Name : Ocepr_1876 (Ocepr_1876)
Accession : YP_004058501.1
Strain : Oceanithermus profundus DSM 14977
Genome accession: NC_014761
Putative virulence/resistance : Unknown
Product : hydroxymethylbilane synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 1900400 - 1901311 bp
Length : 912 bp
Strand : -
Note : COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: ttj:TTHA0345 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; SPTR: Porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, C-terminal do

DNA sequence : 
ATGCGCGTTATCGTCGTAGGCACCCGCGGGAGCCTCCTTGCCCTTACCCAAACCCGCTGGGCGGTCGAGCGGCTGAAGGA
GAACTGGCCCGAGACCGAGTTCAAGATCAAGACGATCCAGACCAAGGGCGACCGCGGCGCCGACCCGCGGGAGCAGAACA
TCTTTGTGGGGGAGCTGGAAGAGGCCCTCCGCCGCGGCGAGATCGACATCGCCGTGCACTCGCTCAAGGACCTGCCCACC
ACCCAGCCCGAGGGCCTGGTGATTGCGGGAGTGCCCCGGCGGGTGGACCCGCGCGACGTCTTCATCGGGCGCAACAGCGT
GGCCCGCATGGCCGACCTGCCCAAGGGGGCGCGCATCGGCACCAGCTCGGTGCGGCGGCGGGCGCAGCTGCTGGCCTGGC
GCGACGACCTGGAGATCGTGCCGCTGCGCGGCAACGTCGATTCACGGCTCAAACGGCTGGTGAGCGAGGACCTGGACGGG
ATCATCCTGGCCGCGGCGGGGCTTTTGCGCCTGGAGATGCGCAACCGCATCGGCGAGTTCGTGGACCCCGAGATCCTGCT
GCCGGCCCCGGGTCAGGGGGCGCTGGCGCTGGAGGTGCGCGAGGGCGACGACATGGCCGACGAACTGGCCTACAGCCTCA
ACCATGCCCCGACGCGTGCGCGGGTGCTGGCCGAGCGCGGCTTCCTGCACGGTCTGGGCGCGGGCTGCCTGGCCCCGGTG
GGGGCGCTGGCGCAGATCGAGGACGACGTGCTGGTCCTCGACGCCGGGGTGCTCTCGCTGGACGGCAAGACGCTGATCCG
CGGAGAGATCGAGGGGGACCCCGAAGAGGCCTGGGAGCTGGGGCTGGAGCTGGCCCGCGACGTGCTCGAAGCCGGCGGCC
GCGAGGTGCTGGCCGAGGCGGCGGGCAACTAG

Protein sequence : 
MRVIVVGTRGSLLALTQTRWAVERLKENWPETEFKIKTIQTKGDRGADPREQNIFVGELEEALRRGEIDIAVHSLKDLPT
TQPEGLVIAGVPRRVDPRDVFIGRNSVARMADLPKGARIGTSSVRRRAQLLAWRDDLEIVPLRGNVDSRLKRLVSEDLDG
IILAAAGLLRLEMRNRIGEFVDPEILLPAPGQGALALEVREGDDMADELAYSLNHAPTRARVLAERGFLHGLGAGCLAPV
GALAQIEDDVLVLDAGVLSLDGKTLIRGEIEGDPEEAWELGLELARDVLEAGGREVLAEAAGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 7e-35 42
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 7e-35 42