Gene Information

Name : Ocepr_1838 (Ocepr_1838)
Accession : YP_004058463.1
Strain : Oceanithermus profundus DSM 14977
Genome accession: NC_014761
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1856131 - 1856790 bp
Length : 660 bp
Strand : -
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: msv:Mesil_0841 two component transcriptional regulator, winged helix family; PFAM: response regulator r

DNA sequence :
ATGGCCCGGGTGTTGCTGGTCGAAGACGAGCCCAGCCTGCGCTTTGCCCTGGCGCACGGGCTCCGCCAGGCGGGGTTCAG
CGTCCTCGACGCCGCCGACGCCCGCGAGGGCTGGGCGCGGCTCGACGAGGCCGAGGTGGTCGTCCTCGACCGGATGCTGC
CCGACGAGGATGGCCTGAACTTCCTGGCGCGCCTCCGCCGCACGCCCCGATACGAGCGGATGCCGGTGTTGATGTTGACG
GCGCGCGCCAGCGAACGCGACCGCGTGGAGGGGCTGCTGGGAGGCGCCGACGACTACCTGACCAAACCCTTCTCCACCGC
CGAGCTGGCGGCCCGGTTGGTGGCGCTGCTGCGCCGCAGCCGCGGCGCGGAGGTCCTGCGGCGCGGGGAACTGGTCGTGG
ACACGGAGCGCGGCCGGGTGACGCTTGGGGGGCGCGAGGTGGGCCTGACGCGGCGCGAGTTCGATCTGCTCGCTTTCCTG
GCGCGGGATCCGGGCCGGGTTTACGACCGGGAGACGCTGCTCGAGCGGGTCTGGGGTCCCGACTTCCTGGGCACCCTGCG
CACGGTGGACCAGCACGTGGCCCAGCTGCGGGAGAAACTGGGGGGGCGTTGGATCGAGACAGTGCGCGGCAAGGGCTACC
GCTTCACGGAGGCCCCATGA

Protein sequence :
MARVLLVEDEPSLRFALAHGLRQAGFSVLDAADAREGWARLDEAEVVVLDRMLPDEDGLNFLARLRRTPRYERMPVLMLT
ARASERDRVEGLLGGADDYLTKPFSTAELAARLVALLRRSRGAEVLRRGELVVDTERGRVTLGGREVGLTRREFDLLAFL
ARDPGRVYDRETLLERVWGPDFLGTLRTVDQHVAQLREKLGGRWIETVRGKGYRFTEAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-17 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ocepr_1838 YP_004058463.1 winged helix family two component transcriptional regulator VFG1389 Protein 7e-21 42