Gene Information

Name : Ocepr_1662 (Ocepr_1662)
Accession : YP_004058288.1
Strain : Oceanithermus profundus DSM 14977
Genome accession: NC_014761
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 1678116 - 1680107 bp
Length : 1992 bp
Strand : -
Note : COGs: COG0021 Transketolase; InterPro IPR005474: IPR005475: IPR005476: IPR005478; KEGG: mrb:Mrub_1828 transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region; SPTR: Transketolase; TIGRFAM: transketolase; PFAM: Transketol

DNA sequence :
ATGACGCAAGAAACCCCCATCGAAAAGCTTGCGATCAACGCGCTAAGGTTCCTGGCCGCCGACGCGGTGGAGGCGGCGAA
GTCGGGCCACCCGGGCATGCCCATGGGCGCGGCGCCGATGGCCTACGTGCTCTGGCACGACTTCCTCAAGCACAACCCCG
CCGACCCGCGCTGGCCCGACCGCGACCGCTTCGTGCTCTCGGCGGGCCACGGCTCGATGCTGCTCTACGCGCTCTTGCAC
CTCAGCGGCTACGACCTGCCGCTCGAGGAGCTGAAGCGCTTCCGCCAGTGGGGTTCGAAGACGCCGGGCCACCCCGAGTA
CGGCCACACCCCGGGCGTCGAGGTGACGACCGGGCCCCTGGGGCAGGGGATCAGCACCGCCGTGGGGCTGGCCCTCGCCG
AGTTCAAGCTCGCGGCCGAGTTCAACCGCGAGCGTTTCCAGATCGTCGACCACCACACCTACGTGATCGCCTCCGACGGC
GACCTGATGGAGGGCGTCGCCTCCGAGGCCTCGAGCCTCGCGGGGCACTGGAAGCTGGGGAAGCTGATCGTCCTCTGGGA
CGACAACCGCATCTCCATCGACGGTTCCACTTCGCTGGCCTTCAGCGAGGACGTGCTGGCGCGTTACAAGGCCTACGGCT
GGCAGACCCTGATCGTCGAGGACGGCAACGACACCGGCGAGATCCGCGCGGCCATCGAGGTCGCCCGGGCCCACACCGCC
GCCCCGACGCTGATCGCCGTGCGCACCCACATCGGCTTCGGCAGCCCCAAGCAGGACACTCCGGACGCCCACGGAGCGCC
GCTGGGTGAGGAGGCGCTGGCGGCCGCCCGTGAGAAGCTGGGCTGGCCCTACGGCCCCTTCGAGATCCCCGAGGAGGTCT
ACGCCCATTACCGCCGCGCCCTGGACAAGGGGCTCGCGGCCCAGGAGGCCTGGGAACAGCGTTTCGAGGCCTACAGCTGG
GAGTTCCCCGAGCTGGGCGAGGAGTTCACCCGCAGGGTCGTCCAGGGGGCGCTGCCCGCGGGCTGGCGCGAGCGCCTGCC
GCGCTTCGAGGCGGACGCCAAGGTGGCCACCCGCAAGGCCAGCGGCCAGGTGCTGGCCGCGCTCTCGCCTCACCTGCCCG
AGCTGCTCGGCGGTTCGGCCGACCTGACGCCCTCGAACAACACCAAGGCCCCCGACATGGCCGACTTCTCGCCCGAGAAC
CCGACGGGCCGCTACATCCACTACGGCGTGCGCGAGCACGCGATGGGGGCGATCCTGAACGGGCTGGCGCTGCACGGGGG
CTTCCGCCCCTACGGCGGCACCTTCCTGGTCTTCTCCGACTACATGCGCGGGGCGGTGCGCCTGGCGGCGCTGATGGGCA
CCCCCGTCGTCTACGTCTGGACCCACGACTCGATCGCCATCGGCGAGGACGGCCCCACCCACCAGCCCGTCGAGCACCTG
ATGAGCCTGCGGGCGCTGCCAAACCTGTGGGTGATCCGCCCCGCCGACGCCGCCGAGACCGCCGTGGCCTGGAGGATGGC
GCTCGAGCGCACCTCCGGCCCCACCGCGCTGATCCTCACCCGCCAGGGGCTGCCGGTGCTCGACCGCGGGCGCTACGCCC
CGGCCGAGGAGGCCCTGAAGGGGGGGTACGTCCTCAGCGAACCCTCGGATCCGCCGCGCGGCGTCCTCGTCGCCACCGGC
AGCGAGGTGGCCCTGGCGCTCGCCGCGCAGGAGCGGTTGGCGGCCGAGGGGCTGCCCGTCCGCGTCGTCAGCCTGCCCTG
TTTCGAGGCCTTCGAGGCCCAGGACGCCGCCTACCGGCGCGCGGTGCTGCCGCCCGAGCTGCCGGCGCTCGCCGTCGAGG
CCGGGGCCACGCTGGGCTGGGAGCGCTACGCCGACGAGGTGATCGGCCTCGACCGCTTCGGGGCCAGCGCCCCCGGCGAG
GTCGTCTACCGCGAACTGGGCTTCACCGCGGAGCACGTGGCCGAGCGGATGAAGGCCCTGCTGGAAAGGTAG

Protein sequence :
MTQETPIEKLAINALRFLAADAVEAAKSGHPGMPMGAAPMAYVLWHDFLKHNPADPRWPDRDRFVLSAGHGSMLLYALLH
LSGYDLPLEELKRFRQWGSKTPGHPEYGHTPGVEVTTGPLGQGISTAVGLALAEFKLAAEFNRERFQIVDHHTYVIASDG
DLMEGVASEASSLAGHWKLGKLIVLWDDNRISIDGSTSLAFSEDVLARYKAYGWQTLIVEDGNDTGEIRAAIEVARAHTA
APTLIAVRTHIGFGSPKQDTPDAHGAPLGEEALAAAREKLGWPYGPFEIPEEVYAHYRRALDKGLAAQEAWEQRFEAYSW
EFPELGEEFTRRVVQGALPAGWRERLPRFEADAKVATRKASGQVLAALSPHLPELLGGSADLTPSNNTKAPDMADFSPEN
PTGRYIHYGVREHAMGAILNGLALHGGFRPYGGTFLVFSDYMRGAVRLAALMGTPVVYVWTHDSIAIGEDGPTHQPVEHL
MSLRALPNLWVIRPADAAETAVAWRMALERTSGPTALILTRQGLPVLDRGRYAPAEEALKGGYVLSEPSDPPRGVLVATG
SEVALALAAQERLAAEGLPVRVVSLPCFEAFEAQDAAYRRAVLPPELPALAVEAGATLGWERYADEVIGLDRFGASAPGE
VVYRELGFTAEHVAERMKALLER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 4e-148 53
tktA AAO17218.1 TktA Not tested tcd island Protein 3e-145 53