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Name : Ocepr_1156 (Ocepr_1156) Accession : YP_004057786.1 Strain : Oceanithermus profundus DSM 14977 Genome accession: NC_014761 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1184829 - 1186082 bp Length : 1254 bp Strand : + Note : COGs: COG0172 Seryl-tRNA synthetase; InterProIPR002317: IPR006195: IPR018156: IPR015866: IPR 002314; KEGG: rmr:Rmar_1968 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase DNA sequence : ATGCTCGACCTGAGGTTCATCCGCGAACACCCCGACCTCGTCAAGGAAGGCATCCGCAAGAAGCGCGAGTTCGACGCGCT GCCGCTGGTGGACGAGCTGCTGGAGCTCGACCGCAGGCGGCGCGAGCTCCTGGCCGAGATCGAGACGCTGCGGGCCCAGC AAAAGAAGCTGGCCAAGGCCGTGGGTCAGGCCAAGGCGAGGGGGGAGGACGCCGGGCCGCTGCTCGAGAAGTCCTCCGAG CTGGCCGAGTACCTGCGCGGCCTGGAGGCGGAGGAAAAGCAGCTCTCGGCCCGCATCCAGGCGATACTGCCCCAGATTCC CAACCTCCCCCACCCCTCGGTGCCGGAAGGCGAAAGCGAGGCCGACAACGTGGTGGTGAAGGAGTGGGGCGAGAAGCCGA TCTTCGACTTCGAGCCCAAGCCCCACTGGGAGCTGGCCGAGCGCCTGGGCGTCGTCGACTTCGAGCGCGGGGCTAAGGTT TCGGGCTCGGGCTTTCCCTTCTTCCTGGGCCGCGGGGCGCGGCTGGTGCGGGCGCTCGAGAACTTCTTCCTCGACTTCCA CACCGCCCGCGGCTTCGTGGAGGTGCGGCCGCCGCTCTTGGTGCGCGAGCCGGCCGCCTTCGGCACCGGGCAGATCCCCG ACAAGGAAGGGATGATGTACGAGGTCTCGGGCGGGTACTACCTGATCCCCACCTCCGAGGTGCCGGTCACCAACCTGCAC GCCGGCGAGATCCTCGAAGCCGACCGCCTGCCCCTCAAGTACACCGCCTACACCCCCAACTTCCGCGTCGAAGCCGGCAG TTACGGCAAGGACGTGCGCGGGCTCAACCGGCTGCACCAGTTCGACAAGGTCGAGATGGTGGTCTTCAGCCACCCCGACG AGAGCTACGACTGGCTGGAGCGGCTGACCCGCCAGGCCGAGGAGCTGCTCGAGCGGCTGGGCCTCCCCTACCGGCGGCTC CTCATGTGCACCGCCGACATGGGCTTCACCCAGGCCAAGAAGTACGACCTGGAGGTCTGGAGCGCCGGCCAGCAGAAGTG GCTCGAGGTGAGCAGCATCTCCAACATGGAGGACTACCAGGCCCGCCGCATGAAGACCCGCTTCCGCGAGCCGGGCGGCA AGCCGCGCCTGGTCCACACCCTCAACGGCTCGGGCCTCGCCTTCCCGCGGGTGCTCGCGGCCCTGATGGAGAACTACCAG ACCCCCGAGGGCGACTTCACCCTCCCCGAGGCCCTGGCGCCCTACCTGAACTGA Protein sequence : MLDLRFIREHPDLVKEGIRKKREFDALPLVDELLELDRRRRELLAEIETLRAQQKKLAKAVGQAKARGEDAGPLLEKSSE LAEYLRGLEAEEKQLSARIQAILPQIPNLPHPSVPEGESEADNVVVKEWGEKPIFDFEPKPHWELAERLGVVDFERGAKV SGSGFPFFLGRGARLVRALENFFLDFHTARGFVEVRPPLLVREPAAFGTGQIPDKEGMMYEVSGGYYLIPTSEVPVTNLH AGEILEADRLPLKYTAYTPNFRVEAGSYGKDVRGLNRLHQFDKVEMVVFSHPDESYDWLERLTRQAEELLERLGLPYRRL LMCTADMGFTQAKKYDLEVWSAGQQKWLEVSSISNMEDYQARRMKTRFREPGGKPRLVHTLNGSGLAFPRVLAALMENYQ TPEGDFTLPEALAPYLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-81 | 50 |
