Gene Information

Name : Ocepr_1135 (Ocepr_1135)
Accession : YP_004057765.1
Strain : Oceanithermus profundus DSM 14977
Genome accession: NC_014761
Putative virulence/resistance : Unknown
Product : ssra-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 1159337 - 1159765 bp
Length : 429 bp
Strand : -
Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR000037: IPR020081; KEGG: mrb:Mrub_1548 SsrA-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein

DNA sequence : 
GTGCTCGAGAACCGCAAGGCGCGCCACGACTACGAGATACTCGAAACCTACGAGGCGGGGATCGCCTTGAAGGGCACTGA
GGTCAAGTCGGTCCGGGCCGGCAAGGTGGACTTTACCGGAGCGTTCGCGCGCTTCGACAACGGCGAGCTCTGGCTCGAAG
ACCTCTACATCGCGCCCTACGAAAAGGGCTCGTACAGCAACCACGAACCCCGGCGCCGCCGCAAGCTGCTGCTGCACCGC
CACGAGCTGAACAAGCTGCGCGGCCGGGTCGAGCAGAAGGGGCTGACGCTGGTGCCGCTCAAGATCTACTTCAACGAACG
GGGGTACGCCAAGGTGCTGCTCGCGCTCGCCCGCGGCAAGCGCGACTACCAGAAGAAGCAGGACGACAAGAAGCGCGCCG
TGGAACGGGAGCTGGAAAAGTGGTACTGA

Protein sequence : 
MLENRKARHDYEILETYEAGIALKGTEVKSVRAGKVDFTGAFARFDNGELWLEDLYIAPYEKGSYSNHEPRRRRKLLLHR
HELNKLRGRVEQKGLTLVPLKIYFNERGYAKVLLALARGKRDYQKKQDDKKRAVERELEKWY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-17 50