Gene Information

Name : Ocepr_1118 (Ocepr_1118)
Accession : YP_004057748.1
Strain : Oceanithermus profundus DSM 14977
Genome accession: NC_014761
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1143492 - 1143707 bp
Length : 216 bp
Strand : -
Note : COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: nar:Saro_0207 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM

DNA sequence : 
TTGAAGAACAGGCTTCCGGTGCTTAGGGCCGAGCGCGGCTGGAGCCAGGCAGCGCTGGCCGAGCGGCTGGGCGTGAGCCG
CCAAACCGTCAACGCCATCGAGAAAGGGCGCTACGACCCCAGCCTGCCGCTGGCCTTCAAGATCGCCGCGGTCTTCGGGC
TGGCCATCGAGGACGTCTTCGAACCCGAGGAAAGCGAGGCTCTCCATGCCGAGTGA

Protein sequence : 
MKNRLPVLRAERGWSQAALAERLGVSRQTVNAIEKGRYDPSLPLAFKIAAVFGLAIEDVFEPEESEALHAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-10 50
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-07 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 9e-08 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ocepr_1118 YP_004057748.1 XRE family transcriptional regulator VFG2168 Protein 4e-08 50
Ocepr_1118 YP_004057748.1 XRE family transcriptional regulator VFG2175 Protein 4e-08 50