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Name : Ocepr_1046 (Ocepr_1046) Accession : YP_004057676.1 Strain : Oceanithermus profundus DSM 14977 Genome accession: NC_014761 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1074152 - 1075648 bp Length : 1497 bp Strand : + Note : COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR002313: IPR006195: IPR018149: IPR004365: IPR 004364; KEGG: ttj:TTHA1041 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Ly DNA sequence : ATGCGGCCGCCCCCCGACCAGCTCAAGCAACGCCTCGCCAATCTGGAAGCCTTGGTCGAGGCCGGGTTCGAACCCTTCCC GTACCGCTACGAGAAGACCCACGACGCGGCGCAGATCCTCGAGGCCCACGCCGGCGCCGCACCCGAGCAGGCCTGGCCCG AGGAGCGCGTCCGCGTCGCCGGCCGCCTGGTCAGCCTGCGGCGGATGGGGAAGGTGACCTTCGCCCACCTGCTCGACGAG AGCGGCCGCATCCAGCTTTACCTGAGCCGCGACGCCACCGAGCAGTACCGCCTGCTCAAGAAGCTCGACATCGGCGACAT CGTCGGCGCCGAGGGCACCGTCTTCACCACCAAGACCGGCGAGGTCACCGTCGCCGTCGAGCGGTGGCAGCCCCTCGTAA AGGCGCTGCGCCCGCTGCCCGACAAGTGGCACGGCATCAAGGACAAGGAGGTGCGCTACCGCCAGCGCTACCTCGACCTG ATCGTCAACCCCGAGGTGCGCGACGTCTTCCGCACCCGCGCCCGGGTAGTCCGGCACATCCGCCGCTTCCTCGAGGAGCG CGGCTTCCTCGAGGTGGAGACGCCGGTCATCCTGCCCACGGCCGGGGGCACCGAGGCGCGGCCCTTCAAGACCTTTCACA ACGCGCTCGCCCACGAGTTCGAGCTGCGCATCTCGCTCGAACTCCCCCTCAAGAAGCTGCTCGTCGGCGGCTTCGAGAAG GTCTTCGAACTGGGCCGGGTCTTCCGTAACGAGGGCATCGACGCCCAGCACAACCCCGAGTTCACGATGCTCGAGGCCTA CTGGGCCTACGCCGACTACCAAGACATGGCGGAAATGACCGAGGCCATGCTTTCGAGCCTGGTGCAGGAGCTGACGGGCG GCTACACCCTCGCGTACCAAGGCCGGACGATCGACTTCACGCCTCCCTTCCGCCGACTCTCCTTCGTGGAGGTGCTGCGC GAGAAGGCGGGGCTCGACTTCGACCCCCTCGACCTCGACCGCCTGCGCATCTGGGCCGACGCCAAGCACCCCGAGCTGAT CGAGGTGCCCAGCTACAAGCTCCTCGACAAGCTCTTCGAGCTCTACGTCGAGGAGGAGCTGCACGACCCCACCTTCGTCT TCGACTTCCCCGCGGTGATCAGCCCGCTGGCCAAGAAGCACCGCGAGCGGGAGGGCCTGACCGAGCGCTGGGACCTCTTC GTCGCGGGGATGGAGCTGGCGCCGGCCTATTCCGAGCTCAACGACCCGCTGGACCAGCGCGAGCGCTTCGAGGAGCAGGC GCGCCGCCGCGAAGGGGGCGACGAGGAGGCCCACCGCGTCGACGAGGACTTCCTCACCGCCCTCGAGCACGGCATGCCCC CGGCGGGCGGCATGGGGCTGGGCATCGACCGCCTGACGATGATCCTCGCCGACCAGCCCTCGATCCGCGACGTCATCCTC TTCCCGCTGCTGCGCCCGCGGGCGCCGGAGGGCGAGGGCGAAGCGCCGGAAAACTGA Protein sequence : MRPPPDQLKQRLANLEALVEAGFEPFPYRYEKTHDAAQILEAHAGAAPEQAWPEERVRVAGRLVSLRRMGKVTFAHLLDE SGRIQLYLSRDATEQYRLLKKLDIGDIVGAEGTVFTTKTGEVTVAVERWQPLVKALRPLPDKWHGIKDKEVRYRQRYLDL IVNPEVRDVFRTRARVVRHIRRFLEERGFLEVETPVILPTAGGTEARPFKTFHNALAHEFELRISLELPLKKLLVGGFEK VFELGRVFRNEGIDAQHNPEFTMLEAYWAYADYQDMAEMTEAMLSSLVQELTGGYTLAYQGRTIDFTPPFRRLSFVEVLR EKAGLDFDPLDLDRLRIWADAKHPELIEVPSYKLLDKLFELYVEEELHDPTFVFDFPAVISPLAKKHREREGLTERWDLF VAGMELAPAYSELNDPLDQRERFEEQARRREGGDEEAHRVDEDFLTALEHGMPPAGGMGLGIDRLTMILADQPSIRDVIL FPLLRPRAPEGEGEAPEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-80 | 45 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 3e-65 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ocepr_1046 | YP_004057676.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-80 | 45 |
