Gene Information

Name : Ocepr_0990 (Ocepr_0990)
Accession : YP_004057620.1
Strain : Oceanithermus profundus DSM 14977
Genome accession: NC_014761
Putative virulence/resistance : Unknown
Product : binding-protein-dependent transport system inner membrane protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1176
EC number : -
Position : 1014276 - 1015145 bp
Length : 870 bp
Strand : -
Note : COGs: COG1176 ABC-type spermidine/putrescine transport system permease component I; InterPro IPR000515: IPR022272; KEGG: msv:Mesil_1568 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems

DNA sequence : 
ATGAATAAGCGCACCCGCTGGACGCGTCTCCTGCCCACCCTGGGGCCGGGCACGGCCTGGTTGCTCGTCTTCACCCTCGT
ACCGACGCTGCTGATCTTCTACACCTCGTTCCTGCAGCGCGATCCCCACGGCTGGCTCAGCGGCCCGCTGACCCTCGAGA
ACTACCGCCGCTTCTTCGGCATCGGGCCGGACGGCCTCGACCCGCTCTACCTCAACATCCTGGGACGCAGCCTGCTGCTC
GGCTTCGTCACCACCTTGGCGACGGTGCTGATCGGCTACCCCTTCGCCTTCTTCATCGCCGGCAGCCCCCGGAAGAACCT
GCTGCTGCTGCTCGTGGTGCTGCCCTTCTGGACCAACTTCCTCATCCGCGTCTACGCCTGGATCGTGATCTTTCAGCGCA
AGGGGGTGCTCAACGCCCTGCTCGGGCAGTTCGGCCTGGACCCGGTGCTGCTCTATCCAAGCTGGACCGCCGTCTACGTG
GGCACGATCTACACCTACCTGCCCTTCCTGATCCTGCCGCTCTACGCCTCGGTGGAGAAGATCGACTGGACCTTGCTGGA
GGCGGCCCACGACCTGGGGGCCGGCAAGCTCCGGGGGTTCTGGCACGCCGTCTTCCCGCAGACGCTGCCCGGCCTGATCG
CGGGCATCCTGCTCGTATTCATCCCCGCGGTCGGCACCTTCGTCATCTCGGATCTGCTCGGCGCGGGCAAGGCGATCCTG
GTGGGCAACGTGATCCAGCAACAGTTCGGCGCCTCGCGCGACTGGGCCTTCGGTTCGGCCGCGGCCTTCGTGCTCATGGC
CGTGGTGCTGACCGGACTCTGGCTCTACGCCCGCTGGGCGGGGGAGCGCGGCATGGAGGAGCTGGTATGA

Protein sequence : 
MNKRTRWTRLLPTLGPGTAWLLVFTLVPTLLIFYTSFLQRDPHGWLSGPLTLENYRRFFGIGPDGLDPLYLNILGRSLLL
GFVTTLATVLIGYPFAFFIAGSPRKNLLLLLVVLPFWTNFLIRVYAWIVIFQRKGVLNALLGQFGLDPVLLYPSWTAVYV
GTIYTYLPFLILPLYASVEKIDWTLLEAAHDLGAGKLRGFWHAVFPQTLPGLIAGILLVFIPAVGTFVISDLLGAGKAIL
VGNVIQQQFGASRDWAFGSAAAFVLMAVVLTGLWLYARWAGERGMEELV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potB BAA36746.1 - Not tested LIM Protein 7e-44 44