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Name : lysS (MBOVPG45_0717) Accession : YP_004056506.1 Strain : Mycoplasma bovis PG45 Genome accession: NC_014760 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 834154 - 835623 bp Length : 1470 bp Strand : - Note : identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499 DNA sequence : ATGGAAAAATACACAGAGCAAGAGCAAGTAAGACGTAATAAATTAAATTTTTATATTGAAAATAATATTGCTCCATTTAA AAAAGCATATGACTTAGGAAAATTAGTTTTAAGTCAAGAAATAGTTGATAAATATAGCTCATTTTCTAGAGAAGAATTGG AAGAAAAAAACATCAGCATTAATGTAACTGGCAGATTAATGACTGTTAGAGGACCATTTTTAGTTTTAAAAGATTCTAAA GGCCTAATTCAGGTGTACTTTAATAAAAAAAGTGATGAGAATTTAGCTAAAATAGTAGCTACTTTTGACATCGGAGACAT TTTATGAGTTAGTGGCACAATTATGAAAACTCATACTGATGCGCTCACCTTAAAGTGCAATAAAATAGAGCTTTTGACTA AAGCACTTAAGCCATTGCCTGAAAAATATCATGGCCTAGTTGATACTGAAGAAAGATATAGACGTAGATGAGTCGACTTA ATTACTAATGATGAGTCAAAAAACAAATTCATTCTGAGGACAAAAATAGTTAAGTGAATTAAAGAATACTTTGATAATTT AGATTACTTGGAAGTCGAAACTCCATTTTTACAAGACTATGTTTCAGGTGCTGCGGCTAAGCCTTTTACAACTCACCACA ATTCGCTAAATCAAGAATTTGTGCTAAGAATAGCGACAGAAATTCCTCTTAAAAAATGTGTTGTAGGCGGTTTGGAAAGA GTTTATGAATTAGGTAGAATTTTTAGAAATGAAGGCTATGACACAACTCATAACCCTGAGTTTACAACAATTGAATTTTA TGAAGCATACTCAAATGTTGAAGGTATGATGGATAGAACTGAAGAATTATTCAAGGTTTTATGTCAAAAATTGGGCAAGT CTGTTTTCGTAAATAATGGCATTGCTATTGACTTATCACAACCATTTAAAAGAGTAAATATGGTTGATGCTGTTAATGAA AAAACTGGTAAAGACTTTAGAAACATAAGCCTTGATGAAGCTATTTTAGAGGCTAAAAAGCACAATATAAAAATTGAAAA ATTTTGAACAACAGGTCATATTATCAATGCTTTGTATGAAGAATTAGTTGAAAGCTCATTAATTCAGCCAACTTTTATAT ATGGTCATCCAATTGAAGTGTCGCCACTAAGTGCTAAATCTAGCGATCCTAGATTTACTGAAAGAGCAGAATTATTTATA AATACCAAAGAATATGCAAATATGTATACTGAGTTAAGTGACCCAATTGACCAATTAGAAAGGTTTAAAAGTCAAATTGA CGAAAAGAAAGCCGGTAATGATGAGGCTAGCGATATTGACTGAGACTTTGTTGATGCTTTAGAATATGGCATGCCACCAA CAGGCGGATGCGGCATTGGAATTGATAGATTAATTATGCTTCTAACAGAAACTAGTTCAATAAGAGATGTGTTGTTATTC CCTACACTTAAAAGAGTTAATAAAAAATAA Protein sequence : MEKYTEQEQVRRNKLNFYIENNIAPFKKAYDLGKLVLSQEIVDKYSSFSREELEEKNISINVTGRLMTVRGPFLVLKDSK GLIQVYFNKKSDENLAKIVATFDIGDILWVSGTIMKTHTDALTLKCNKIELLTKALKPLPEKYHGLVDTEERYRRRWVDL ITNDESKNKFILRTKIVKWIKEYFDNLDYLEVETPFLQDYVSGAAAKPFTTHHNSLNQEFVLRIATEIPLKKCVVGGLER VYELGRIFRNEGYDTTHNPEFTTIEFYEAYSNVEGMMDRTEELFKVLCQKLGKSVFVNNGIAIDLSQPFKRVNMVDAVNE KTGKDFRNISLDEAILEAKKHNIKIEKFWTTGHIINALYEELVESSLIQPTFIYGHPIEVSPLSAKSSDPRFTERAELFI NTKEYANMYTELSDPIDQLERFKSQIDEKKAGNDEASDIDWDFVDALEYGMPPTGGCGIGIDRLIMLLTETSSIRDVLLF PTLKRVNKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-90 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004056506.1 | lysine--tRNA ligase | VFG1668 | Protein | 1e-90 | 43 |
