Gene Information

Name : Ftrac_0692 (Ftrac_0692)
Accession : YP_004052802.1
Strain : Marivirga tractuosa DSM 4126
Genome accession: NC_014759
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 860477 - 861262 bp
Length : 786 bp
Strand : +
Note : COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR017871: IPR003439: IPR003593; KEGG: chu:CHU_2026 Mn/Zn ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: Mn/Zn ABC transporter, ATP-bi

DNA sequence : 
ATGATCAGACAAGTTGATAATCCCATTTTAGAAATCCATGATTTATCTGTTGCATATGAACGCAAGCCTGTCCTTTGGGA
CGTTGATTTAAGTTTGCCTGAAGGTCAATTAATTGGCATAATAGGACCGAATGGCGCTGGAAAATCCACTTTATTAAAAG
CAATAATGGGGCTATTACCTCTCAATAGCGGCTATATACAAATAAACGGAAAGCCTTTGGAAGATATGCGCCACAAGATC
AGTTATGTCCCGCAAAGAGAGAGTGTCGATTGGGACTTCCCGACCTCTGTTTATGAAGTTGTCATGATGGGCAGATATGG
ACAACTTGGTTTATTCAATAGACCAAAAAAAGCAGATAAAGAGATCGTGATGGATAGCTTGAGGAAAGTGGGGATGGATA
ATTACAAAGATCGACAGATCTCTCAGCTTTCTGGAGGTCAGCAACAGAGAGTATTCTTAGCACGTGCATTAGCGCAACAA
GCAGATATCTACTTTATGGATGAACCCTTCGCTGGCGTTGATGCTGCAACTGAAAAAGCTATCATCAAATTACTTGGAGA
GATGTCTGCACAAAATAAAACCGTGATTGTTGTACATCATGATTTGCAATCCGTTGCCAAATATTTTGATTGGATTATTC
TACTGAATATGAGATTAGTAGCATCTGGACCTATTAACGAAGCATTTACACCTGAACTACTGCAGGAAACCTATGGTGGT
AAATTGACTTTATTAACAGAAATAAGCGATCTAATTCAAAAACATAGATTTCCAAACCGAGAATAA

Protein sequence : 
MIRQVDNPILEIHDLSVAYERKPVLWDVDLSLPEGQLIGIIGPNGAGKSTLLKAIMGLLPLNSGYIQINGKPLEDMRHKI
SYVPQRESVDWDFPTSVYEVVMMGRYGQLGLFNRPKKADKEIVMDSLRKVGMDNYKDRQISQLSGGQQQRVFLARALAQQ
ADIYFMDEPFAGVDAATEKAIIKLLGEMSAQNKTVIVVHHDLQSVAKYFDWIILLNMRLVASGPINEAFTPELLQETYGG
KLTLLTEISDLIQKHRFPNRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-49 47
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-49 47
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-48 41
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-47 41
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-47 41
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-48 41
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-48 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ftrac_0692 YP_004052802.1 ABC transporter BAC0400 Protein 7e-72 60
Ftrac_0692 YP_004052802.1 ABC transporter BAC0440 Protein 1e-50 45
Ftrac_0692 YP_004052802.1 ABC transporter BAC0350 Protein 2e-48 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ftrac_0692 YP_004052802.1 ABC transporter VFG0526 Protein 2e-48 41