Gene Information

Name : Ftrac_3758 (Ftrac_3758)
Accession : YP_004055833.1
Strain : Marivirga tractuosa DSM 4126
Genome accession: NC_014759
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.1
Position : 4450947 - 4452104 bp
Length : 1158 bp
Strand : -
Note : COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: gfo:GFO_3443 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; SPTR: Cys/Met metabolism P

DNA sequence :
ATGAGCAAGTCTAGCAAATACAGATTTGGTACCAAAGCAATACATTCTGGAGTTGAGCCTGATTCAGCAACTGGCGCTAT
CATGACTCCTATTTACCAAACCTCAACTTATGTTCAGTCAGCCCCAGGTGAACACAAAGGCTATGAATACAGCCGTTCTC
AAAACCCAACCCGTGAAGCATTGGAGAAAAGCATTGCAGCTTTGGAAAATGCCGATTTCGGACATTGTTTTGCTTCTGGA
CTTGCTGCGATTGATGCCATTATCAAAACCTTGAAACCAGGTGATGAGGTAATTAGCACCAACGATCTCTACGGAGGTAC
TTATAGAATATTCACAAAAATCTTTCAAGATTTCGGCATTCATTTCCATTTTGTTAACATGTCAAATGCTGCTGATGTTG
AAAAACATATTACAGAAAAAACAAAATTGATATGGGTAGAAACCCCTACTAATCCGATGATGAATATCATTGATATTAGA
GCGATTGCTGATATTGCCAAAAAACATGCTGTTACCTTAGCGGTGGATAACACTTTTTCAACCCCTTATTTACAAAATCC
TTTAGATTTGGGTGCAGATTTGGTAATGCATTCGGTTACAAAATACATAGCTGGACATTCCGATGTAGTGATGGGCGCAT
TAGCTACAAGCAATAAAGAATTGTCTGAAAAATTAACCTTTATTCAGAATGCAAGTGGTGCCGTGCCAGGTCCACAAGAT
TGTTTTTTAGTTTTAAGAGGAATCAAAACATTGCATCTAAGAATGCAAAGACATTGTGAAAATGGCGCAGGTATTGCAAA
CTTTTTAAAATCACACCCAAAAGTGGACAAGGTATTTTGGCCAGGTTTTAAATCACACCCTAATCATGAAATTGCATGCA
AACAAATGCATGATTTTGGAGGAATGATATCGTTTTCATTAAAAGAAAATACAAAATCCGCAGCTACGGAAATCTTGAAG
AAATTTAAATTATTTACTTTGGCGGAATCATTAGGTGGGGTTGAATCATTAAGTGGACATCCAGCGACCATGACTCATGC
CAGCATTCCAAAAGCAGAGCGCGATAAAGTGGGCCTTTCTGATTCTTTAATTCGATTGAGTGTAGGAGTTGAAGACATAG
AGGATTTGATTCAAGATTTAAAACAAGCATTATCCTAA

Protein sequence :
MSKSSKYRFGTKAIHSGVEPDSATGAIMTPIYQTSTYVQSAPGEHKGYEYSRSQNPTREALEKSIAALENADFGHCFASG
LAAIDAIIKTLKPGDEVISTNDLYGGTYRIFTKIFQDFGIHFHFVNMSNAADVEKHITEKTKLIWVETPTNPMMNIIDIR
AIADIAKKHAVTLAVDNTFSTPYLQNPLDLGADLVMHSVTKYIAGHSDVVMGALATSNKELSEKLTFIQNASGAVPGPQD
CFLVLRGIKTLHLRMQRHCENGAGIANFLKSHPKVDKVFWPGFKSHPNHEIACKQMHDFGGMISFSLKENTKSAATEILK
KFKLFTLAESLGGVESLSGHPATMTHASIPKAERDKVGLSDSLIRLSVGVEDIEDLIQDLKQALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-88 51
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-87 50
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-59 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ftrac_3758 YP_004055833.1 cystathionine gamma-lyase BAC0207 Protein 6e-72 44