Gene Information

Name : Ftrac_3540 (Ftrac_3540)
Accession : YP_004055618.1
Strain : Marivirga tractuosa DSM 4126
Genome accession: NC_014759
Putative virulence/resistance : Resistance
Product : copper-translocating p-type atpase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 4179796 - 4181829 bp
Length : 2034 bp
Strand : -
Note : COGs: COG2217 Cation transport ATPase; InterProIPR006403: IPR006416: IPR001757: IPR018303: IPR 001756: IPR008250: IPR005834; KEGG: zpr:ZPR_3414 copper-transporting ATPase, P-type (CopB); PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase

DNA sequence :
ATGTCTTCAAACCATCAAGATGCTCAACATCATCATGATCATAATGATCAGAATGGACATAACCATAATGAACACGATCA
TCACCAACATCATGCTCAGATGATAGAAGATTTCAAAAAGCGATTTTGGATTTCAATTATTATCACAATCCCTATCATGG
TTTTGGCTCCCATGATTCAAGAATTATTAGGATATGAATTAAGGTTTCAATTTGATCGATACGTTCAATTTGCTCTGTCT
ACGATAGTCTTTTTCTATTGTGGATATCCTTTCCTAAAAGGGTTAAAAGATGAGATTGAAGATCGCAAACCAGGCATGAT
GACCTTAATCGCACTGGCTATAAGTGTGGCCTACTTTTATAGCTCAGCTGTAGTTTTCGGGCTGGAAGGTAAAATTTTCT
TTTGGGAACTAACTAGTCTTATTACTATCATGCTTTTAGGACACTGGATTGAGATGAAGTCGATAATGGGTGCTTCTGGT
GCAGTTGAAGAATTGGCGAAATTACTTCCCTCAACCGCCTTAAAAGTGGATGAAAAGGGAGATACGCATGAAGTAAAAAT
ATCCGAATTGGAAGCAGGAGATTTAGTACTGGTAAAACCCGGAGAAAAAATCCCTGCCGATGGAATTATTGAAAAAGGCA
AAAGTGATATTAATGAATCCATGATAACAGGTGAATCAAAACCAGCAAGCAAAAAAGAAGGCGATGAGGTAATTGGTGGT
TCTGTTAACGGTTCTTCCTCTATTCAATTTAAAATCAAAGAAGATAGCGAAGGTTCTTATTTGAATAAGGTAGTGGAAAT
GGTGAAATCCGCTCAAGAGACAAAATCCAAAACACAAAATCTTGCCAATAAAGCGGCCGCTTGGCTATTTTACATTGCTC
TTTTTTCTGGCTTTACAACTTTAGGCGTATGGTTGTGGCAAGGTAAAGAATTTGATTATGCACTGGAAAGAATGGTAACT
GTTATGATTATTGCTTGTCCACATGCTTTGGGCTTGGCAATGCCTTTAGTTGTGGCTATTTCAACTTCTGTCTCTGCTCA
AAACGGACTACTGATAAGAAATAGAACTGCATTTGAAAATGCTCGCAATATCACCACCATTATTTTTGATAAAACAGGGA
CACTCACAAAAGGAAATTTTGTAGTCAATCAGTTTAAAAGTACTTCTAGTGAATATGAAAATAAAGGCATACTTAAAATG
GCGGCATCTTTGGAGAGAGAATCCGAACATCCCATTGCAACAGGCATTGTAAAGAAACACGAAGAAGAAAAACTAGATTT
TCATGACATTTCTGATTTTGAAAACCTCACAGGTGAAGGTATTCAAGCAAAAATCAACGGTGAGTCAATTAAAGTTGTCA
GCCCTGGCTATTTGGAAGAAAATAGTATTGAATTACCTGAAGATACAAAAAATGAAAAAGCAGAGACGATAGTTTATATT
CTGAAAGATAAAAATTTGATAGGCTATATTTCTTTGGCTGATGAAATAAGGGATGAATCTTATGAAGCTGTGAAAATATT
GAAAGAAAATGGCTTAAAAGTCATCATGGCTACAGGAGACAATAAGGAAGTGGCTAAATCAGTCAGTAAAGAATTAGGCT
TAGATGATTATTATGCGGAAGTACTTCCCGAGGATAAACAAAAGATCATAGAAGATCTGCAAGAAAAGGGCGAAATAGTA
GCCATGACAGGCGATGGCGTAAATGATGCGCCTGCACTTGCCAAAGCAGATGTAGGAATTGCAATAGGATCAGGAACGGA
TGTGGCAGCTGAAACAGCTGATATCATTTTGGTAAACAGCAATCCAATGGATATAGTGCATCTGCTTGCATTTGGAAAAT
CAACTTATCAAAAAATGATGCAAAACTTGTTCTGGGCAGCAGGTTATAATATTGTGGCTATCCCTATGGCAGCTGGAGCA
TTGGCTTTTGCAGGAATTATTTTAAGTCCTGCCGTTGGCGCAGGTTTAATGAGTTTAAGTACAATTATAGTTGCACTCAA
TGCTCAATTGCTGAAAAGGAAGATGAAGAATTGA

Protein sequence :
MSSNHQDAQHHHDHNDQNGHNHNEHDHHQHHAQMIEDFKKRFWISIIITIPIMVLAPMIQELLGYELRFQFDRYVQFALS
TIVFFYCGYPFLKGLKDEIEDRKPGMMTLIALAISVAYFYSSAVVFGLEGKIFFWELTSLITIMLLGHWIEMKSIMGASG
AVEELAKLLPSTALKVDEKGDTHEVKISELEAGDLVLVKPGEKIPADGIIEKGKSDINESMITGESKPASKKEGDEVIGG
SVNGSSSIQFKIKEDSEGSYLNKVVEMVKSAQETKSKTQNLANKAAAWLFYIALFSGFTTLGVWLWQGKEFDYALERMVT
VMIIACPHALGLAMPLVVAISTSVSAQNGLLIRNRTAFENARNITTIIFDKTGTLTKGNFVVNQFKSTSSEYENKGILKM
AASLERESEHPIATGIVKKHEEEKLDFHDISDFENLTGEGIQAKINGESIKVVSPGYLEENSIELPEDTKNEKAETIVYI
LKDKNLIGYISLADEIRDESYEAVKILKENGLKVIMATGDNKEVAKSVSKELGLDDYYAEVLPEDKQKIIEDLQEKGEIV
AMTGDGVNDAPALAKADVGIAIGSGTDVAAETADIILVNSNPMDIVHLLAFGKSTYQKMMQNLFWAAGYNIVAIPMAAGA
LAFAGIILSPAVGAGLMSLSTIIVALNAQLLKRKMKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 3e-103 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ftrac_3540 YP_004055618.1 copper-translocating p-type atpase BAC0629 Protein 1e-157 56
Ftrac_3540 YP_004055618.1 copper-translocating p-type atpase BAC0079 Protein 8e-131 46
Ftrac_3540 YP_004055618.1 copper-translocating p-type atpase BAC0383 Protein 3e-107 43