Gene Information

Name : Ftrac_3470 (Ftrac_3470)
Accession : YP_004055550.1
Strain : Marivirga tractuosa DSM 4126
Genome accession: NC_014759
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4094992 - 4095711 bp
Length : 720 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: dfe:Dfer_3760 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: ATPase; PFAM: ABC transporter

DNA sequence : 
ATGGGAAACTCTGTAATTCAAACAAAAGATATAGCCAAAATCTATAAAATGGGAACTGAAACGGTGGAAGCCCTCAAATC
AGTTACTATTAATATTGATAAAGGTGAATATGTAGCTTTCATGGGACCATCAGGTTCTGGCAAATCTACTTTAATGAATA
TAATTGGTTGTCTTGATACTCCAACAAGAGGTACCTATGAATTAGCAGGTCAAAATGTAAGCGAAACTTCAGAAAATGAT
CTAGCCGAAATAAGAAATAAAGAAATCGGCTTCGTATTTCAAACCTTTAATTTATTACCCAGACAATCATCACTTGAAAA
CGTAGCATTACCTTTAGTTTATGCAGGTTTTAGTAAATCGCAAAGGGAAGAAAGAGCGTTGGAAGTATTAGGAAGCGTAG
GGCTTGCCGATAGAGCCTATCATAAACCTAACGAACTTTCAGGTGGTCAGCGTCAAAGAGTCGCTATTGCAAGAGCTTTG
GTTAATAACCCAAGTATCATATTGGCCGATGAACCAACGGGTAACCTAGACACGAAAACATCCTATGAGATCATGGAGTT
GTTCCAGATGTTGCACGATCAAGGAAATACAATTGTTATGGTGACGCACGAAGATGATATAGCCCAATATGCTCATAGAA
TTATCAGGATGCGTGATGGGTTGGTTGAGTCAGATAATATTAATAATGATATTACAAGAGTTGGAGCCGAATCGGTTTAG

Protein sequence : 
MGNSVIQTKDIAKIYKMGTETVEALKSVTINIDKGEYVAFMGPSGSGKSTLMNIIGCLDTPTRGTYELAGQNVSETSEND
LAEIRNKEIGFVFQTFNLLPRQSSLENVALPLVYAGFSKSQREERALEVLGSVGLADRAYHKPNELSGGQRQRVAIARAL
VNNPSIILADEPTGNLDTKTSYEIMELFQMLHDQGNTIVMVTHEDDIAQYAHRIIRMRDGLVESDNINNDITRVGAESV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-34 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-36 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ftrac_3470 YP_004055550.1 ABC transporter NC_012469.1.7686878. Protein 9e-60 58
Ftrac_3470 YP_004055550.1 ABC transporter NC_008702.1.4606598. Protein 2e-48 49
Ftrac_3470 YP_004055550.1 ABC transporter CP001581.1.gene598.p Protein 1e-42 45
Ftrac_3470 YP_004055550.1 ABC transporter CP001581.1.gene798.p Protein 5e-39 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ftrac_3470 YP_004055550.1 ABC transporter VFG0869 Protein 2e-25 43