Gene Information

Name : Ftrac_3150 (Ftrac_3150)
Accession : YP_004055233.1
Strain : Marivirga tractuosa DSM 4126
Genome accession: NC_014759
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone clpb
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3713352 - 3715976 bp
Length : 2625 bp
Strand : -
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR004176: IPR003959: IPR013093: IPR019489: IPR 001270: IPR017730: IPR018368: IPR003593; KEGG: sli:Slin_0495 ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; ATPase

DNA sequence :
ATGAATTTAAACGAATATACCATAAAATCGCAGGAAGCTATTCAAAAAGCTGCTGAGATTGCGCTGGGAAATGGTCAGCA
GGCTATTGAAACCGGCCATTTATTGAAAGCCATTCAGCAAACGGATGAGAATGTTCTCTCTTTTGTAAATAAGAAACTCA
ACATTAATAAAGCTCAGTTAGAAACTAAATTGAATGAATTGGTAGAGAGCTATCCTAAAGTAAGTGGGGCACAACCTTAT
TTATCCAATGATGCTCATAAGTCGATGACGGAAGCCAAGAAATTCCTGAAAGAATTCAAGGATGATTATGTTGCCATTGA
GCATTTAATCTTAGGTATCTTAAAAACAGGAGACAAAGCATCCAATTTATTAAAAGATGCAGGTTATTCAGAAAAAGACT
TGATCAAAGCCATTAAAGAATTAAGGGGCGGAGACTCCGTTAAAGACCAAAACGCAGAATCTAAATACCGATCATTAGAG
CGCTATAGTATTAACCTGAACGAGCAAGCCAAAGCGGGAAAAATTGATCCAGTTATAGGTAGAGATGAGGAAATCAGGAG
GGTTTTGCAAATATTATCCAGAAGGACTAAAAACAATCCTATTCTGTTAGGAGAACCAGGAGTTGGTAAAACTGCCATAG
TGGAAGGAATGGCACAGAGAATTGTAGATGGTGATGTACCTGAAAACTTGAAAGAGAAAATCCTTATTTCTCTAGATATG
GGGCTTTTGGTTGCCGGTGCCAAATACAAAGGAGAGTTTGAGGAAAGATTAAAATCAGTAATCAAAGAAGTAACCGATTC
TGATGGACAAATTATTTTATTCATAGATGAGATCCACACTTTGATTGGAGCCGGTGGTGGAGAAGGTGCCATGGATGCCG
CAAATTTATTGAAGCCTGCGCTGGCTAGAGGAGAATTACATGCGATAGGTGCTACTACTTTAAAAGAGTATCAGAAACAT
ATTGAAAAAGACAAAGCACTAGAAAGAAGATTCCAATCTGTAATAGTGGATGAACCTTCTCAAGAGGATGCTATTTCCAT
CTTAAGAGGAATCAAAGATAAATACGAAGTTCACCATGGTGTGCGCATAAAAGATGATGCTGTAATTTCTGCTGTAGAAT
TATCTAGCCGGTATATATCTGATAGGTTTTTACCAGATAAAGCCATTGACTTAATGGATGAAGCCGCTTCCAAGATGCGA
ATTGAAATAGACTCTCTTCCAGAAGAACTTGATGAGCTCAACAGAAGAATCATGCAGTTGGAAATTGAGCGAGAAGCCAT
GAGGCGTGAAAAAAATAAAGATAAAGAAAACTTAGTCAATAAAGACTTAGCTGATCTGAATGAAAAAAGACAGGATTTAA
AAGCTAAATGGCAAGGCGAGAAAGAAGTTATTCAAGGCATCCAAAAGCAGAAAGAACATATTGACAAGCTAAAACTGGAA
GCTGAGCAAGCTGAGCGTTCGGGTGATTTTGGAAAAGTAGCTGAAATCCGATACGGTAAATTAACCGAAGCAGAAGCCAA
GCTAAATGAGTTCCAAAGCAAGATGGTGGAGATGCAGAATTCCAGCCATACTTTGCTAAAAGAGGAAGTAGGAGCAGAAG
AAATTGCAGACGTAGTGGCTCGTTGGACTGGAATTCCAGTTAGCAAAATGCTACAAAGTGATAGAGAAAAACTCTTGCAT
CTTGAAAAGGAATTAGGCAAAAGAGTAGCAGGGCAAAGAGAAGCCATTGGTGCTTTATCTGATGCTGTAAGAAGAAGCCG
AGCAGGATTGCAAGACCCTCGCAAGCCGATTGGATCCTTCATTTTCATGGGTACAACTGGCGTAGGTAAAACGGAACTAG
CAAAAGCATTGGCTGAATATTTATTCAATGACGAAAATGCGATGGTCAGAATCGATATGTCCGAATATCAGGAAAGACAT
GCAGTCAGCCGATTGGTAGGTGCGCCTCCAGGCTACGTAGGTTATGATGAAGGTGGTCAGTTAACAGAAGCGGTTCGTAG
AAAACCGTATTCAGTAATCCTGTTAGATGAAATTGAAAAAGCACATCCGGACACCTTTAACATCCTGCTGCAAGTTTTGG
ATGATGGTCGATTGACTGATAATAAAGGGCGATTGGCGAATTTCAAAAATACTATTATCATCATGACCACAAACATTGGC
TCCAGCTTAATTCAAGAGCGCCTAAGCCCTGAGAATTATATGGGAGATGAATGGAAGAAAGCCGAAATCATGGATCAAAC
CCGAAATGAAGTGTTTGAATTATTGAAGCGTTCGGTGAAGCCAGAATTTCTAAATAGAATTGATGAAACCATCATGTTCG
AACCCTTGAATGAAGAAATTTTAAGACAAATTGTAAGCATTCAGTGGAAGGAAGTTCAGAAGCGCTTAAAAGAAAATGGT
GTTCAAATAGATGCCACCAATGATGTGCTCGATTACTTGGGAAGAGTAGGATACGATCCTCAATTTGGCGCCAGACCATT
AAAAAGAGTAATGCAGCGTACTATTCTGAACCAACTTTCTAAACAAATTCTGGCTGGCGAGATCAGTAATGACAGCACAG
TGCTAGTAGAAATGGAGAATGATGAAATTGTCTTCAAAAATGTTGAAGATGTAGAAATAGAATAA

Protein sequence :
MNLNEYTIKSQEAIQKAAEIALGNGQQAIETGHLLKAIQQTDENVLSFVNKKLNINKAQLETKLNELVESYPKVSGAQPY
LSNDAHKSMTEAKKFLKEFKDDYVAIEHLILGILKTGDKASNLLKDAGYSEKDLIKAIKELRGGDSVKDQNAESKYRSLE
RYSINLNEQAKAGKIDPVIGRDEEIRRVLQILSRRTKNNPILLGEPGVGKTAIVEGMAQRIVDGDVPENLKEKILISLDM
GLLVAGAKYKGEFEERLKSVIKEVTDSDGQIILFIDEIHTLIGAGGGEGAMDAANLLKPALARGELHAIGATTLKEYQKH
IEKDKALERRFQSVIVDEPSQEDAISILRGIKDKYEVHHGVRIKDDAVISAVELSSRYISDRFLPDKAIDLMDEAASKMR
IEIDSLPEELDELNRRIMQLEIEREAMRREKNKDKENLVNKDLADLNEKRQDLKAKWQGEKEVIQGIQKQKEHIDKLKLE
AEQAERSGDFGKVAEIRYGKLTEAEAKLNEFQSKMVEMQNSSHTLLKEEVGAEEIADVVARWTGIPVSKMLQSDREKLLH
LEKELGKRVAGQREAIGALSDAVRRSRAGLQDPRKPIGSFIFMGTTGVGKTELAKALAEYLFNDENAMVRIDMSEYQERH
AVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVILLDEIEKAHPDTFNILLQVLDDGRLTDNKGRLANFKNTIIIMTTNIG
SSLIQERLSPENYMGDEWKKAEIMDQTRNEVFELLKRSVKPEFLNRIDETIMFEPLNEEILRQIVSIQWKEVQKRLKENG
VQIDATNDVLDYLGRVGYDPQFGARPLKRVMQRTILNQLSKQILAGEISNDSTVLVEMENDEIVFKNVEDVEIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-99 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 7e-100 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ftrac_3150 YP_004055233.1 ATP-dependent chaperone clpb VFG2084 Protein 4e-101 43