Gene Information

Name : Ftrac_2789 (Ftrac_2789)
Accession : YP_004054875.1
Strain : Marivirga tractuosa DSM 4126
Genome accession: NC_014759
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0172
EC number : 6.1.1.11
Position : 3279856 - 3281130 bp
Length : 1275 bp
Strand : -
Note : COGs: COG0172 Seryl-tRNA synthetase; InterProIPR006195: IPR015866: IPR002314: IPR002317: IPR 018156; KEGG: sli:Slin_5630 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase

DNA sequence :
ATGTTACAAGTTGCAAATTTGCGTGAGGATAAAGCCAATGCAGTCAAAGGCTTATTGAAAAGAAATATTGAAAATGCTGA
ATCTCTAATCGATGGAATAATTGCCTTAGATGATAAGAGGAAAGCTCTTCAAACTGAATTGGATTCAGTATTGGCCGAAT
CAAATCAAATTTCAAAAAGCATTGGCGTTTTGATGAAGGAAGGTAAGAAGGAAGAAGCCGAGAAAGTAAAAACCAAAACC
GCTGAACTCAAGCAACGCAGCAAAATCTTGCAGGAAGAATCTCAGGAGATTGAAAAAGAATTAATGGACAGTCTCTATCA
AATCCCTAATGTGCCGCATGAAGATGTAAAAAAAGGGAAAGGCGAAGATGACAACGAAATCCTTTCAGAGCATGGCAAAA
AACCTGAATTATACTCAGGGAAAAAACCTCACTGGGATTTGATAAAAGATTATGACATTATAGACTTCGATTTAGGAATT
AAAATAACTGGTGCAGGATTCCCTGTTTACAAAGGCAAGGGTGCAAGAATGCAAAGAGCTCTATTAAATTTCTTTTTGGA
TGAAGCCGAAAAACAAGGCTTCAAAGAAATTCAACCACCCGTTTTAGTTAATGAAGCCTCTGGAATCGGAACAGGCCAAT
TACCGGATAAAGAGGGTCAAATGTATCATATTGAAGATACAGACTTGTATTTGATCCCTACAGCAGAAGTACCTATTACT
AATCTTTTGAGAGATGAAATCATCAACGAAGAAGATCTACCTATAAAATTAACTGCCTATACGCCTTGTTTCCGAAAAGA
AGCGGGCTCTTGGGGTGCACATGTTAGAGGATTGAACAGATTACATCAATTTGATAAGGTGGAAATTGTGCAAGTTCTAC
ATCCTGATAAATCTTATCAGGCATTGGAGGAAATGAGCAGTTATATTCAAAGCTTACTAACTAAATTAGAATTGCCTTAT
CGAGTTCTGAGATTATGCGGTGGAGATCTAGGTTTTACTTCTGCCTTGACTTATGATATGGAGGTTTGGTCTGCGGCACA
AGAAAAATGGTTAGAGGTGAGCTCCGTTTCTAATTTTGAAACTTATCAGTCTAATCGATTGAAACTGCGTTACAAAGATG
CGGATAAGAAAAAACACTTATTGCATACTTTAAATGGTAGTGCTCTAGCATTCCCTAGAATTTTAGCCGCAATTTTGGAA
AATAATCAGACAGAAAAAGGAATTAGAGTACCTAAAGTGCTGCAATCTTATACTGGTTTTGAGTGGATTGATTAA

Protein sequence :
MLQVANLREDKANAVKGLLKRNIENAESLIDGIIALDDKRKALQTELDSVLAESNQISKSIGVLMKEGKKEEAEKVKTKT
AELKQRSKILQEESQEIEKELMDSLYQIPNVPHEDVKKGKGEDDNEILSEHGKKPELYSGKKPHWDLIKDYDIIDFDLGI
KITGAGFPVYKGKGARMQRALLNFFLDEAEKQGFKEIQPPVLVNEASGIGTGQLPDKEGQMYHIEDTDLYLIPTAEVPIT
NLLRDEIINEEDLPIKLTAYTPCFRKEAGSWGAHVRGLNRLHQFDKVEIVQVLHPDKSYQALEEMSSYIQSLLTKLELPY
RVLRLCGGDLGFTSALTYDMEVWSAAQEKWLEVSSVSNFETYQSNRLKLRYKDADKKKHLLHTLNGSALAFPRILAAILE
NNQTEKGIRVPKVLQSYTGFEWID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 1e-67 43