Gene Information

Name : Ftrac_2667 (Ftrac_2667)
Accession : YP_004054753.1
Strain : Marivirga tractuosa DSM 4126
Genome accession: NC_014759
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 3147959 - 3149242 bp
Length : 1284 bp
Strand : -
Note : COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: wsu:WS0054 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisatio

DNA sequence :
ATGACTAATTTTGCATTTCATTTGGATTATAGTATGAAAAAAATCGCAGTAATTGGATTGGGCTATGTGGGATTACCTCT
AGCAGCAGAATTCGGAAAATACAGAGAAGTCTTAGGTTTCGACATTAATAAAAAACGTGTTCAAGAACTTAAAGATGGTT
ACGATAGAACATTAGAAGTTGACAGTGATGAATTGAAAGGCGCTAAGCATCTTCAGTATACAGCTGAAATTGAAGACCTT
AAGGAGGCTGACTATTATATTATAACAGTTCCTACTCCTATCAACGAATATAAGCAACCGGATTTGACTCCTTTAAAGAT
GGCTTCTGCCACAGTTGGTAAGACATTAAAAAAAGGAGATATTGTTATTTATGAATCTACGGTTTACCCGGGTTGTACGG
AAGATGATTGTGTCCCTATTTTGGAAAAAGAAAGTGGATTAAAATTCAATCAGGACTTTTTCTGTGGTTATTCACCAGAA
AGAATCAATCCGGGAGATAAAGAGCACCGATTACCGACTATTAAAAAAGTGACTTCAGGAAGCACTCCTGAAATTGCTGA
AGAGGTAGATCAATTATATAAAGAAATTATTACCGCTGGCACCCATAAAGCAGCCACTATTAAAGTTGCAGAAGCAGCAA
AAGTGATAGAAAACTCTCAAAGGGATTTAAACATTGCTTTCGTTAATGAATTAGCATTGATTTTCGATAAAATGGGCATA
GATACTGCCGATGTATTAGAAGCAGCCGGCACAAAATGGAATTTCTTACCGTTTAAACCAGGCTTAGTGGGTGGACATTG
CATAGGAGTTGATCCATATTACTTAACGCATAAAGCAGAGGCTTTAGGTTACCATCCACAAGTAATTTTAGCTGGGAGAA
GAATCAATGACAACATGGGTGCTCATGTGGCCAGCTCTGTAGTAAAATTGATGGCACAAAAAGGCTCGGTCATTAAAGGC
TCAAAAGCTTTAGTAATGGGTATTACTTTCAAAGAAAATTGCCCCGATATTCGGAACAGTAAAGTAATAGATGTCATAAA
GGAATTACAGTCTTATGGAATTGATGTTGAAACTTACGATCCACAGGCTGATAAAGAAGAAGTGAAACATGAGTATGGGG
TTGAATTAATTGACAAACCAAGTTCAGATTATAACGCCATCGTATTGGCTGTTTCGCATAAAGAATTTAAAGATTTCAAC
TTATCCAACCATTTAAACAGTAATGGAGTCACTTATGACATTAAAGGATTTTTTGAGAGAGGTAAAGCAGATAAAAGATT
ATAA

Protein sequence :
MTNFAFHLDYSMKKIAVIGLGYVGLPLAAEFGKYREVLGFDINKKRVQELKDGYDRTLEVDSDELKGAKHLQYTAEIEDL
KEADYYIITVPTPINEYKQPDLTPLKMASATVGKTLKKGDIVIYESTVYPGCTEDDCVPILEKESGLKFNQDFFCGYSPE
RINPGDKEHRLPTIKKVTSGSTPEIAEEVDQLYKEIITAGTHKAATIKVAEAAKVIENSQRDLNIAFVNELALIFDKMGI
DTADVLEAAGTKWNFLPFKPGLVGGHCIGVDPYYLTHKAEALGYHPQVILAGRRINDNMGAHVASSVVKLMAQKGSVIKG
SKALVMGITFKENCPDIRNSKVIDVIKELQSYGIDVETYDPQADKEEVKHEYGVELIDKPSSDYNAIVLAVSHKEFKDFN
LSNHLNSNGVTYDIKGFFERGKADKRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 2e-127 62
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 2e-127 62
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-113 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ftrac_2667 YP_004054753.1 nucleotide sugar dehydrogenase VFG0431 Protein 8e-128 62