Gene Information

Name : Ftrac_1710 (Ftrac_1710)
Accession : YP_004053806.1
Strain : Marivirga tractuosa DSM 4126
Genome accession: NC_014759
Putative virulence/resistance : Virulence
Product : atpase aaa-2 domain protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2047445 - 2050039 bp
Length : 2595 bp
Strand : +
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR001270: IPR004176: IPR003959: IPR001943: IPR 013093: IPR019489: IPR003593: IPR018368; KEGG: chu:CHU_1079 ATP-dependent Clp protease, ATP-binding subunit; PFAM: ATPase AAA-2 domai

DNA sequence :
ATGGAAGCAAAATTTTCAAACAGAGTAAAAGAGGTAATTTCTTTGAGCCGTGAAGAGGCGCTTAGATTAGGCCATGACTA
TATTGGCACAGAACACTTACTTTTAGGAATGGTAAGAGAAGGGGAAGGTGTGGCAATCAGTCTCTTGAAAAAGCTTGGCG
TTTCGCTCGATGAACTTCGAGGGGAATTAGAACGAAGCACAAGAGGAACCGCAACGAACAACGTTAAAAATCTAGCCAAT
ATACCGTTGACGAAGCAATCCGAAAAAGTTTTGAAAATTACTTATTTGGAAGCTAAAATTTTTAAAAGCCAGTTAATCGG
AACAGAACATTTATTATTGTCCATATTACGGGATGAAGACAATATTGCATCTCAAGTAATGGAGAAATTTGATGTGAATT
ACGATGTAATAAAAGAGCTTTTAGAATATCAAACGCAAAACCCTATGGCTTCTTCCGATACGGAAGATAGCGATGAGGAC
TCAGGTAAAATTTTTGGTGGTGGACCAAGAGATACTGGATCTGGTTCTGGTGGATCTAAATCAAGCGAAAAATCTAAAAC
TCCTGTTTTGGACAATTTCGGACGCGATTTAACTAAAATGGCTGAAGAAGATAAGTTAGATCCTATCGTAGGTCGTGAAA
AAGAAATTGAGCGTGTAGCCCAAATATTATCCAGAAGAAAAAAGAACAACCCTATTTTAATTGGTGAGCCAGGTGTTGGT
AAAACCGCCATAGCTGAAGGTTTAGCATTAAGAATTGTTCAACGAAAAGTTTCCAGAGTTCTATTTGGAAAAAGAGTAGT
GACCTTAGATTTGGCTTCTTTAGTAGCTGGGACAAAATATAGAGGTCAGTTTGAAGAAAGAATGAAAGCCGTGATGAATG
AGTTGGAGAAATCTCCTAATGTTATCTTATTCATTGATGAGTTGCATACCATAGTGGGTGCAGGTGGCGCTTCAGGTTCT
TTGGATGCCAGTAATATGTTCAAACCGGCATTAGCTAGAGGAGAAATTCAATGTATTGGTGCTACAACATTAGATGAGTA
TCGTCAATATATTGAAAAAGATGGTGCATTAGCCAGACGTTTCCAAATGGTAATGGTAGACGCTACCACGCCAGAGGAAA
CGAGAGAGATTCTAATGAACATCAAAGATAAATATGAAGAACATCATAATGTTAATTTCACTGATGAGGCAATTGAATCA
TGTGTGAAATTAAGTGATCGATATATTTCTGATAGATTTTTGCCTGACAAAGCCATTGACGTAATGGATGAGGCAGGTGC
ACGAGTTCACTTGAACAATATTCATGTTCCTGATGCAATCGTAAAACTTGAAGCTTCAATTGAAGATATCAAGAAAGAAA
AGAATCAGGTAGTCAGAAGTCAGAAATACGAAGAGGCGGCTCGACTTAGAGATACAGAGAAAAAACTTATCGAAGAGCTA
GAGAGCGAAAAAAGAAAATGGGAGGAAGACACTAAAGCTAAGCGATACACCGTAAAAGAAGAAAATGTTGCGGAAGTTAT
TGCTATGATGACGGGTGTTCCAACCAAGCGAGTAGCTCAAAATGAAAGCGTTAAGCTGAAAGGAATGGGTGATGATTTGA
AAAAGCAAGTTATCGGTCAGGATGAAGCAATTGGAAAACTTTCTAAAGCTATTCAAAGAACAAGAATTGGCTTAAAAGAT
CCGAAAAAGCCGATTGGTTCATTCGTTTTCTTAGGCCCGACTGGTGTTGGTAAAACTGAGCTAGCAAAAGTTCTTTCTAC
TTATCTATTTGATAAGGAAGATGCGCTTATCAGAATTGATATGAGTGAATATATGGAGAAATTCTCTGTATCGAGATTGG
TAGGAGCGCCTCCGGGCTACGTTGGCTATGAAGAAGGTGGTCAGCTTACTGAAAAAGTAAGAAGAAAGCCTTATTCAGTT
GTTCTGTTGGATGAGATTGAAAAAGCGCACCCAGATGTTTTCAACTTATTGTTGCAAGTTCTGGATGACGGTATCTTAAC
TGATGGGCTGGGAAGAAGAGTAGACTTTAGAAACACCATTATTATCATGACTTCTAACATTGGGGTTCGTGATTTAAAGG
ATTTTGGTGCAGGAATTGGATTCGCAAGTAGCGCCAAAGCTGATAGCTCCAATGAGGTGATGAAATCGACTATTCAAAAT
GCACTGAAAAAGGCTTTCAGTCCTGAATTCTTGAATAGATTGGATGATGTGATTGTGTTTAACCATCTTGAAAGAGAGCA
TTTGCATAAAATCATTGATATCTCATTGAAAAAAGTCTTTGACAGAATGTTGTCATTAGGTTATGATATTGATTTAACTG
ATGCAGCTAAAGATTTCTTATCCAAGAAAGGATATGATCAGCAATATGGTGCAAGACCATTGAACAGAGCCATCCAGAAA
TATCTGGAAGACTTAGTTGCGGAAGAGATCTTAAACGAAAATATAAAAATTGGTGACTCCATCATAGCAGATCATGATGG
TAAAGCAGAAACACTCTTTATTAAATCGAAGAAAAAGAAGAAAGAAGAAAAAAAGAACAAGAAAGACCAAGATAAAGAGG
ATACTAACCAAGAAAACAAAAAAGAGGCTGATTAA

Protein sequence :
MEAKFSNRVKEVISLSREEALRLGHDYIGTEHLLLGMVREGEGVAISLLKKLGVSLDELRGELERSTRGTATNNVKNLAN
IPLTKQSEKVLKITYLEAKIFKSQLIGTEHLLLSILRDEDNIASQVMEKFDVNYDVIKELLEYQTQNPMASSDTEDSDED
SGKIFGGGPRDTGSGSGGSKSSEKSKTPVLDNFGRDLTKMAEEDKLDPIVGREKEIERVAQILSRRKKNNPILIGEPGVG
KTAIAEGLALRIVQRKVSRVLFGKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKSPNVILFIDELHTIVGAGGASGS
LDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALARRFQMVMVDATTPEETREILMNIKDKYEEHHNVNFTDEAIES
CVKLSDRYISDRFLPDKAIDVMDEAGARVHLNNIHVPDAIVKLEASIEDIKKEKNQVVRSQKYEEAARLRDTEKKLIEEL
ESEKRKWEEDTKAKRYTVKEENVAEVIAMMTGVPTKRVAQNESVKLKGMGDDLKKQVIGQDEAIGKLSKAIQRTRIGLKD
PKKPIGSFVFLGPTGVGKTELAKVLSTYLFDKEDALIRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSV
VLLDEIEKAHPDVFNLLLQVLDDGILTDGLGRRVDFRNTIIIMTSNIGVRDLKDFGAGIGFASSAKADSSNEVMKSTIQN
ALKKAFSPEFLNRLDDVIVFNHLEREHLHKIIDISLKKVFDRMLSLGYDIDLTDAAKDFLSKKGYDQQYGARPLNRAIQK
YLEDLVAEEILNENIKIGDSIIADHDGKAETLFIKSKKKKKEEKKNKKDQDKEDTNQENKKEAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ftrac_1710 YP_004053806.1 atpase aaa-2 domain protein VFG0079 Protein 0.0 52
Ftrac_1710 YP_004053806.1 atpase aaa-2 domain protein VFG0080 Protein 5e-146 51