Gene Information

Name : Ftrac_1492 (Ftrac_1492)
Accession : YP_004053590.1
Strain : Marivirga tractuosa DSM 4126
Genome accession: NC_014759
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein ribd
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 1798420 - 1799499 bp
Length : 1080 bp
Strand : -
Note : COGs: COG0117 Pyrimidine deaminase; InterPro IPR002125: IPR002734: IPR016192: IPR004794; KEGG: chu:CHU_0203 bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: bifunctional

DNA sequence :
ATGAATTTTTATTTAGTTTTGCCAGTGATGAGTAAACAAGATGAATTATTTATGCAACGTGCCCTGCAATTGGCTGGTTA
CGGCAAAGCTACTGCTAGCCCTAATCCGATGGTGGGTTGTGTAATAGTTTTAGATGGAAAAGTAATAGGAGAAGGTTGGC
ACAAAAAAGCTGGTGAGCCTCATGCTGAAGTGATGGCAATTCGTTCTGTTGAAAATCCAGAGCTTTTAAAATCATCTACT
GCTTATGTCACCCTAGAACCTTGCGCTCATTATGGTAAAACACCACCTTGTGCGGAACTATTGGTTGAAAAGCAGCTAAA
AAAAGTAGTGATAGGTGCTGTTGATCCAAATCCATTAGTGGCCGGAAAAGGAATCCAAATCTTAAAAAAAGCAGGAATTG
AAGTGGAATCTGCGGTTTTGGAACAAGAATGTTTAGAGGTTAATAAAGCCTTTTTCACTTATATGCAGAAAAAACGTCCT
TACATTATTTTAAAATGGGCGCAAACTTCTGATGGTTTTATTGCAAGAGAGAATTTTGATTCCAAATGGATTAGTAATCC
CTTATCTAGGCAAATAGTACATAAATGGCGCACCGAGACTGATGCTATATTGATTGGTAAGAATACTGCAAAGTATGATG
ATCCTCAGCTAACAGCTCGTGATTGGTCAGGTAAAAATCCTATTCGGTTGGTAATTGATCATGATTTGACTTTAGGTAAT
GATTTAAAAATCTTTGATGGGGAACAAAAGACCATTTTTTTTCATTCTCAGGATCAAAAAATAGAAAGGAAAGGGATTGC
AGCCATCAAGTTAAGCAAGGAGGATTTCCTAAGAGATATGCTGAATTATTTGCATCAAGAAAAAATTCAATCAGTATTAA
TAGAAGGAGGAGCTCAAACTGTACAATCTTTTATCGATGCTGGTTTGTGGGATGAAGCCCGTATCTTTACTGCGTCTGTT
AGCTTTGAGAAAGGCATTAAAGCAGCGGAACTAAAAAGCCATCAGCTCGTTTCCCAAGAAAATATTCAAGACAAAAACCA
GACAGATGTTTTGACTACTTATCGAAACATGAGTCGATAA

Protein sequence :
MNFYLVLPVMSKQDELFMQRALQLAGYGKATASPNPMVGCVIVLDGKVIGEGWHKKAGEPHAEVMAIRSVENPELLKSST
AYVTLEPCAHYGKTPPCAELLVEKQLKKVVIGAVDPNPLVAGKGIQILKKAGIEVESAVLEQECLEVNKAFFTYMQKKRP
YIILKWAQTSDGFIARENFDSKWISNPLSRQIVHKWRTETDAILIGKNTAKYDDPQLTARDWSGKNPIRLVIDHDLTLGN
DLKIFDGEQKTIFFHSQDQKIERKGIAAIKLSKEDFLRDMLNYLHQEKIQSVLIEGGAQTVQSFIDAGLWDEARIFTASV
SFEKGIKAAELKSHQLVSQENIQDKNQTDVLTTYRNMSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 5e-45 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 5e-45 42