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Name : Calni_0837 (Calni_0837) Accession : YP_004050911.1 Strain : Calditerrivibrio nitroreducens DSM 19672 Genome accession: NC_014758 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 879049 - 880353 bp Length : 1305 bp Strand : - Note : COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: saf:SULAZ_0339 VI polysaccharide biosynthesis protein VipA/TviB; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose DNA sequence : ATGTATAAAATCGACTCTTTTTTGAAAGGATCCCCTGATTTTATCGCCATTATTGGGCTTGGGTATGTAGGTTTGCCCCT GGCGGAAGTTTTTGATAGAAGGTATAATGTAATAGGTTTTGATATCAACAAAAACAGAATAGATGAATTAAAAAAGGGGT ACGATAGGACTAAGGAGGTGGACTCCGAAACACTCAAAAAGTGTACAATAGATTTCACCTCAAACCCAGATGCGATCTCA AAAGCAAGGGTAATAATCGTGACAGTCCCCACACCTGTGGATGAATACAACATTCCGGATCTCAGACCGGTGAAATCCGC CACATCTACAGTTGGCGCTTATATGCCAAAAGGTGCCATCGTCGTATATGAATCCACCGTATACCCTGGTCTTACGGAAG AGGAATGTATCCCGATTTTAGAAAAGGAAAGTGGTTACAAATGGAAAAAAGACTTTTTTGTCGGATATTCCCCCGAAAGG GTCAATCCAGGGGATAAACTACATACAGTGGATAAAATAACAAAAGTGGTGGCGGGTGATACTAAAGAAACCTTGGATTT CTTATCTGAACTTTATGGCGGGGTTATAACGGCTGGTGTACATAAAGCATCTTCCATAAAGGTTGCTGAAGCTGCCAAAG TCATTGAAAATACCCAGAGGGATATAAATATCGCATTGATGAACGAGCTGGCACTAATCTTCGATAGAATCGGTATCTCC ACCAAAGATGTTTTGGATGCGGCTGCCACAAAATGGAACTTTTTGCGCTTCGAACCTGGTCTGGTGGGGGGACACTGCAT AGGAGTGGATCCATATTATCTTACCTTCAAAGCGCAGGCTCTGGGGCATCATCCGGAAGTTATTCTTTCCGGTCGCAGAA TAAACGATAACATGGGGAAGTTTATCGCTGAAAAGACGGTAAAAAAACTCATAAAAGCAGGCAAAACTGTAAAAGATTCA AAAATATTGATACTGGGGCTCACATTTAAAGAGAATATCAGCGATATCAGAAATACAAAGGTAATAGATATAATAAACGA GCTAAACGAATATGGTACAAAAACATTCGTTTATGATCCAAAAGCTTATCCCGAAGAAGTGAAAGATGAATACGATATAG AGCTTATAAATGATTTTAAGATGTTTAAGCCTTATGATGCAGTAATCATTGCGGTGAAGCATAAGGAGTTTATAGATTTT GGGTATGAAAATATCAAATCGCTAATGGATTATCCTGTAATAATAGATGTGAAGGGGATATTCTCAGACATACCCAAAGG GGATATAATTTACTGGTGTTTATAA Protein sequence : MYKIDSFLKGSPDFIAIIGLGYVGLPLAEVFDRRYNVIGFDINKNRIDELKKGYDRTKEVDSETLKKCTIDFTSNPDAIS KARVIIVTVPTPVDEYNIPDLRPVKSATSTVGAYMPKGAIVVYESTVYPGLTEEECIPILEKESGYKWKKDFFVGYSPER VNPGDKLHTVDKITKVVAGDTKETLDFLSELYGGVITAGVHKASSIKVAEAAKVIENTQRDINIALMNELALIFDRIGIS TKDVLDAAATKWNFLRFEPGLVGGHCIGVDPYYLTFKAQALGHHPEVILSGRRINDNMGKFIAEKTVKKLIKAGKTVKDS KILILGLTFKENISDIRNTKVIDIINELNEYGTKTFVYDPKAYPEEVKDEYDIELINDFKMFKPYDAVIIAVKHKEFIDF GYENIKSLMDYPVIIDVKGIFSDIPKGDIIYWCL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-113 | 59 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-98 | 55 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-98 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Calni_0837 | YP_004050911.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 1e-98 | 55 |
