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Name : Calni_0478 (Calni_0478) Accession : YP_004050554.1 Strain : Calditerrivibrio nitroreducens DSM 19672 Genome accession: NC_014758 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 491575 - 492840 bp Length : 1266 bp Strand : + Note : COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR006195: IPR015866: IPR002314: IPR018156: IPR 002317; KEGG: ddf:DEFDS_1957 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA liga DNA sequence : ATGCTGGATTTAAAATTTGTAGTGAATAATATCGATTATGTGAAACAAAAAACTTTACAAAGGAATTACGAATTCGATTT TGAAAAGATAGTTGAACTGGATTTAAAAAGAAGGGGTCTTATTCAAAAGGTTGAAGAGCTCAAAAAATACAGAAATGAAG TGTCAAAGCAGGTTGGAATATTTAAAAAAGAGGGGAAAGATATAAGTGAGATTTCTTCTAAAATGAGATCCATATCTGAT GAGATTGATAACCTGGATAAGGAACTTTCTGAAGTTCAGCAGCAATTGAATGATGTAATGCTTATGATTCCAAATATAAT TGATGATTCTGTGCCAATAGGAAATGATGAGAATGACAATCCTGAAGTAAAAAAATGGGGTGAAAAAAGGGTTTTCGATT TTACCCCAAAGTCCCACTGGGAGATCGCTGAAAAGCTTGATATCGTTGACTTTGAAAGGGGGGCAAAGCTTTCCAAATCG AGGTTTTCGATATATAAAGGGCTGGGGTCAAGGCTGGAAAGAGCGTTGATAAACTTTATGCTTGATACCCATATTGCTAA AGGATATACAGAGATTATTCCACCTCTACTGGTTAATGCTAAGGCCATGACCGGGACTGGCCAATTACCGAAGTTTGAAG AAGAGCTTTTTAAGTGTGAAAGAGATGAATTATATCTCATACCTACGGCGGAGGTGCCTGTAACAAACATCTATGCAGAT GAGATAATAGATTACGACAAACTTCCTTTGAATTTTGTTTCTTATACACCATGTTTTAGAAGGGAAGCCGGCTCTTATGG TAAAGATGTTAGGGGATTGATTAGGCAACATCAGTTTAATAAAGTGGAATTGGTTAAGATAGTTGAGCCTGAAAGATCTA TGGAAGAATTGGAGATTTTGACAGACAACGCTGCAGAAATATTGAGATTATTGGGTTTGCCATACAGGATCATTAAGCTT TGTAGTGGTGATCTTGGATTTTCTTCTTCCATAACATACGATATAGAGGTCTGGTTGCCGGGGCAAAACTGTTATCGGGA GATATCATCATGTAGCAATTTCAAGGATTTTCAGTCAAGAAGAGCAAAGATAAGGTATAGGGATAGAAATAAAAATGTAG TATTTCCTCATACACTAAATGGTTCGGGGCTTGCGGTTGGGAGAACATTTCTGGCAATTTTAGAGAATTATCAGCAGGAG GATGGTTCTGTGGTAGTTCCCGATGTTTTAAAGCCTTACATGGGTGGGGTAGATATTATAAAATAG Protein sequence : MLDLKFVVNNIDYVKQKTLQRNYEFDFEKIVELDLKRRGLIQKVEELKKYRNEVSKQVGIFKKEGKDISEISSKMRSISD EIDNLDKELSEVQQQLNDVMLMIPNIIDDSVPIGNDENDNPEVKKWGEKRVFDFTPKSHWEIAEKLDIVDFERGAKLSKS RFSIYKGLGSRLERALINFMLDTHIAKGYTEIIPPLLVNAKAMTGTGQLPKFEEELFKCERDELYLIPTAEVPVTNIYAD EIIDYDKLPLNFVSYTPCFRREAGSYGKDVRGLIRQHQFNKVELVKIVEPERSMEELEILTDNAAEILRLLGLPYRIIKL CSGDLGFSSSITYDIEVWLPGQNCYREISSCSNFKDFQSRRAKIRYRDRNKNVVFPHTLNGSGLAVGRTFLAILENYQQE DGSVVVPDVLKPYMGGVDIIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-106 | 54 |
