Gene Information

Name : Calni_0450 (Calni_0450)
Accession : YP_004050526.1
Strain : Calditerrivibrio nitroreducens DSM 19672
Genome accession: NC_014758
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 460158 - 460853 bp
Length : 696 bp
Strand : +
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: dap:Dacet_1013 two component transcriptional regulator, winged helix family; PFAM: response regulator r

DNA sequence :
ATGGCATGCAAAATTCTGATAATTGATGACGATTATGAAATACTCGATATGCTAAAGATTCTGTTGGAAGTGGAAGGGTA
TGAAGTGGATACCGCTTCCAATGGATTTACCGGGCTTGAAAAATTAAAAAAATCGTCTTATAATCTTATATTGCTGGATC
TAAACCTCCCAGATATTGCTGGTGAACAGTTATGTAAAGCCATCAGAAAAAATAGTGAACTCCCTATACTGATACTTTCC
GCAAAAGAGAGTGTTACCGATAAGGTTTTGTGTCTTGAGTATGGTGCCGATGACTATATCACCAAACCTTTCCAAAATAT
AGAGCTTATTGCCAGAATAAAAGCTATATTGAGGCGTTGCGCATGCAATTATGGTACGGAGGAAGAGCATACCAGTATCC
TGTATTATAAAAATTTTATCATAGATGTAGAGAATATGATTGTCAAAAGGGATGATGAAGTTATTAATTTTACACCAAAA
GAGTTTGAAATCTTCCTTTATCTGGTGAGAAATAAAGGGAAAATTGTATCAAGAGATAAGATGATCAATGAACTATGGGG
CAAAGACAATCTATACAAATGGTCCAGAAGCATAGATGTTCATATTCAACATATAAGGCAGAAGATTGAGAAAAACAGTA
AAGGGCATCTGTACCTTAAAACTATTTCTGGAGTGGGATACAAGCTGGAAGAATGA

Protein sequence :
MACKILIIDDDYEILDMLKILLEVEGYEVDTASNGFTGLEKLKKSSYNLILLDLNLPDIAGEQLCKAIRKNSELPILILS
AKESVTDKVLCLEYGADDYITKPFQNIELIARIKAILRRCACNYGTEEEHTSILYYKNFIIDVENMIVKRDDEVINFTPK
EFEIFLYLVRNKGKIVSRDKMINELWGKDNLYKWSRSIDVHIQHIRQKIEKNSKGHLYLKTISGVGYKLEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboR YP_006309915.1 SboR Not tested FWisland_1 Protein 1e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calni_0450 YP_004050526.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 1e-31 44
Calni_0450 YP_004050526.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 2e-31 44
Calni_0450 YP_004050526.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 2e-31 44
Calni_0450 YP_004050526.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 2e-31 44
Calni_0450 YP_004050526.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 2e-31 44
Calni_0450 YP_004050526.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 2e-31 44
Calni_0450 YP_004050526.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 1e-31 44
Calni_0450 YP_004050526.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 2e-31 44
Calni_0450 YP_004050526.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 1e-31 44
Calni_0450 YP_004050526.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 2e-31 44
Calni_0450 YP_004050526.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 3e-27 42