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Name : Calni_0376 (Calni_0376) Accession : YP_004050452.1 Strain : Calditerrivibrio nitroreducens DSM 19672 Genome accession: NC_014758 Putative virulence/resistance : Unknown Product : ssra-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 384727 - 385182 bp Length : 456 bp Strand : + Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR000037; KEGG: ddf:DEFDS_1882 SsrA RNA (tmRNA)-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGAAGGTTTTAACCCAGAACAGGAAAGCTTATCATGATTATGAAATCCTTGAAACTTATGAGGTGGGTATAGTTCTTCA GGGGACAGAGGTAAAGTCATGTAAAAATGGGCAGGTGAATCTAAAAGACTCCCACATAAGAATAGTCAATGGTGAAGCAT TTTTGCTGAATGCTCATATATCACCTTATGAACAGGGGAATTATACTAATCATGAACCCACAAGGACGAGAAAACTTCTA TTACACAAGCGGGAGATCAATAAATTGGCGGGTAAAGTACAGGAAAAAGGTCTTACGCTTGTTCCGCTTAAAATGTACTT GAAGAAAAATAGGGTGAAACTTGAGATTGCTCTGGCAAAAGGTAAAAAGACGCATGATAAAAGGGATGAAATAAAGAAAA AAGATTTAGAAAAAGAGTTTTCACGAGATTTTAAAAATAGTTACAAAATTAGGTAG Protein sequence : MKVLTQNRKAYHDYEILETYEVGIVLQGTEVKSCKNGQVNLKDSHIRIVNGEAFLLNAHISPYEQGNYTNHEPTRTRKLL LHKREINKLAGKVQEKGLTLVPLKMYLKKNRVKLEIALAKGKKTHDKRDEIKKKDLEKEFSRDFKNSYKIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 4e-32 | 54 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 1e-30 | 51 |
