Gene Information

Name : Calni_1981 (Calni_1981)
Accession : YP_004052039.1
Strain : Calditerrivibrio nitroreducens DSM 19672
Genome accession: NC_014758
Putative virulence/resistance : Unknown
Product : hydroxymethylbilane synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 2053749 - 2054675 bp
Length : 927 bp
Strand : -
Note : COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: ddf:DEFDS_0810 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; SPTR: Porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, C-terminal

DNA sequence : 
ATGGAAAAAATCACAATAGCTACAAGGGGAAGCAAATTGGCGCTCTGGCAAGCAAACCATATCAAATCGTTACTTACCAA
TAGATACCCAGAAATGCTTGTGGAGCTTAAAATTATCAAAACTCAAGGAGATATAATTCTGGATGTGCCCCTTGCCAAAA
TAGGTGGTAAAGGACTTTTTGTGAAAGAGATAGAAAATGCTCTAATTGAAAATGAGGCTGATCTGGCCGTTCATAGTATG
AAGGATGTACCGGTGGAACTCCCTGATGAGCTGGAGATTTATGTAAATCCTCATAGAGAATCACCATTTGATGCCTTTCT
GTCGGTAAAGTATAATAACTTAGATGAATTGCCCAGGGGGGCAAAGCTAGGTACGAGTAGTTTAAGGAGAAAGGTTCAGA
TATCGAGGATAAGACCGGATATAGAAATAACGGATTTGAGGGGAAACGTGGATACCAGAATAAGAAAACTCACCGAAGGA
ACATTTGATGCAATAATTTTAGCCAGAGCCGGACTAAACAGGCTAAACCTTCTTGAATGGGCAAAATATACATTTGATGA
TTCTGAGATTGTACCATCCGTTTGCCAGGGGACATTGGGAATTGAAGTGAGGAAAGATGATGATAGGATAAAAAATATCC
TCAAATTTATGAAAGATGAAAAAACTGAGATTGTCACAAGAGCCGAAAGGGCTTTTTTGAGAAGATTGGAAGGTGGATGT
CAGGCTCCCATAGGTGGGTATTGCAAAATAGAGGGTGGTAAATTAAAGATGATCGGCTTTTTATCGTCACTTGACGGTGA
TGAGTTTTTGAAGTATGAAGAATATGGTGATATGGATAAACCTGAAGTATTAGGTGAGTCTGTGGCGGAAAAGATACTTA
TAAACGGTGGTAAAAAAATTTTGGATGATATATATGCCAGGTCGTAA

Protein sequence : 
MEKITIATRGSKLALWQANHIKSLLTNRYPEMLVELKIIKTQGDIILDVPLAKIGGKGLFVKEIENALIENEADLAVHSM
KDVPVELPDELEIYVNPHRESPFDAFLSVKYNNLDELPRGAKLGTSSLRRKVQISRIRPDIEITDLRGNVDTRIRKLTEG
TFDAIILARAGLNRLNLLEWAKYTFDDSEIVPSVCQGTLGIEVRKDDDRIKNILKFMKDEKTEIVTRAERAFLRRLEGGC
QAPIGGYCKIEGGKLKMIGFLSSLDGDEFLKYEEYGDMDKPEVLGESVAEKILINGGKKILDDIYARS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-64 51
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-64 51