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Name : Calni_1943 (Calni_1943) Accession : YP_004052008.1 Strain : Calditerrivibrio nitroreducens DSM 19672 Genome accession: NC_014758 Putative virulence/resistance : Unknown Product : protein translocase subunit seca Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 2012812 - 2015409 bp Length : 2598 bp Strand : + Note : COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterPro IPR000185: IPR014018: IPR011115: IPR011130: IPR 011116: IPR004027; KEGG: ddf:DEFDS_0046 preprotein translocase subunit A; PFAM: SecA DEAD domain protein; SecA preprotein cro DNA sequence : ATGATAGGAATTCTTAAAAAGATTTTTGGTAAAGATGAAAGTGAAAAATATATTAAAAAAATAACGCCAATAGTTCAACA GATAAATAATCTGGAACCAAAGATATCCAAACTTTCAGATGAAGAGCTCAGAGAGAAAACAGATTATTTCAAAATATTAC TCGCAGAAGGGAGATCCCTTGATGATATTCTGGTGGAAGCCTTTGCGGTGGTGAGGGAAGCATCAAGGAGAACACTTGAC ATGAGGCATTTTGATGTACAGCTAATAGGTGGATATGTACTGCATAAAGGGGCAATTGCTGAGATGAAAACAGGGGAAGG TAAAACCCTTGTGGCTACCCTTGCCCTATACCTCAACGCCCTTGAAGGGAAAGGTGCCCACCTGGTGACCGTCAATGATT ACCTGGCAAAACGTGATGCACTCTGGATGGGTACAATTTATCTTTTTCTGGGTCTTACGGTGGGTGTAATCCAGCAAAAT GGAAGCTACCTTGTGGAATGGGACAACAAAGAAAAATTCACCACCAAGCTTGTCCCCTGTGAAAGGGTGGATGCCTACGC CGCAGATATCACATACGGTACAAACAATGAGTTTGGATTCGATTATCTTAGGGACAACATGAAATACAGTTTGGAGGACT ACTGCCAAAAAAATCTTAATTTTGCCATCGTGGATGAGGTGGATAGTATCCTGATAGATGAAGCAAGAACACCTCTTCTA ATAAGTGGTCCCACCGAAAGCTCTGTGGAGATATATTACCATATAGATAAAGTTGTGAGGAATCTCTCAAAAGATACAGA TTATACTGTAAATGAAAAGGATAAGATAGTAAAGCTCACCTACGAAGGGATCAGTAAAATAGAGAAGATCATGAATATAG AAAACCTTTACGATGCAAAGAATATCGACCTATTGCATTATATCAATAATTCCCTCAAAGCCCACAACCTCTTTCACAAG GATGTGGATTATGTTGTGCAAAATTCTCAGGTGGTGATAGTGGATGAATTCACCGGGCGCTTGATGCCAGGAAGAAGGTA TTCCGACGGTATCCATCAGGCTATCGAAGCAAAAGAAGGGGTAAAGATTGAAAGTGAAAATCAAACCCTTGCTTCGATTA CATTCCAAAACTTTTTCAGGATGTACAAAAAACTTGCCGGTATGACTGGCACTGCCGCCACAGAAGCCCAGGAATTTATG GAGATCTACGGGCTAAAGGTTGTCCCTATACCCCCAAACCGACCTATGATAAGGGTTGATCATCCGGATCAGATCTATAA AACCGCCAAAGAAAAGTATGATGCCATATTAAAAGAGATCATAGAGATGCATAAAAAAGGGAGACCTGTTTTGGTTGGTA CAGTATCGATAGACAAATCGGAGTATTTAAGTAAGCTACTGTCAAAAAAATTAGTCCCCCATCAGGTGCTAAATGCAAAA CATCATGAAAAAGAAGCATCCATTATCGCAAACGCCGGAGCCAAAGGGGCTGTAACAATCGCCACAAATATGGCTGGAAG GGGAACCGACATTAAGATAAAAGAAGAAGTTAAAAACTTAGGAGGGCTTCATATCATTGGCACAGAAAGGCATGAATCCC GCAGAATCGACAATCAATTAAGAGGTAGATCAGGAAGGCAGGGGGATCCAGGTTCTTCAAGATTCTTTCTGAGCCTTGAA GATGATCTTTTAAGAATCTTTGGATCCGAAAAGATATCATTCATTATGGATAAATTGGGGATGAAAGAAGGGGAGCCGAT AGAACACCCACTTATAAACAAAGCCATCGAAAATGCCCAGAAAAAGGTTGAAGGGTTGCATTTTGAAATAAGAAAGCACC TTTTAGAATACGACAACGTAATGAACCAACAGAGGCAGATAGTATATGGACTGAGAAAAAGTATATTATCAGACGAAGAG ATTGAGCAGGTAATCGTGGAAGAGATTCACAACCTTGCGGATATAATGATAGAAGATTATATTTTATCCCCTGAAACCCC TGATTATGATGGATTAAAAATGGAAATCGAGAAAGTATTTGATATAACAGTAGATGAACTGCCTGATGCCAATCGCAAAA ATACGTCCCCCCTGAAAGAAAAAATTATTTCATTAGCACTAAAAAAATTAGATGAAAAGAAAGAGCTATTAGGAGAACAT TTCGCACCTGTAATCAGGTTTGTAATGATAAACACCCTTGATTCAAAATGGAAAGAGCATCTACTCACAATGGATCACTT ACGGGATAGTGTAGGTCTCAGGGGTTATGGGCAAAAGGACCCACTCATAGAATACAAAAAAGAATCTTTCAACATCTTTA CAGATATGATGAGGCGGATCTATTACGAGACAACAGAACTCGTTTACCATGTACAGCTGAAATCTGAAGAGGATATTGAG CTTAAAGAGGGAAAAAAACAAAAAATGAAAGAAGAAAAGAAAGATATATTCTCCGATGAACCATCAGAAGAGAAGGGAAC CCCCATAAAAAGGGAGACTCCCAAAATAGGGAGAAACGACCCCTGCCCCTGTGGTAGCGGTAAAAAATACAAAAAATGCT GTGGAAGTGATGGTTCCACCTCGGATACTGAAGAGTGA Protein sequence : MIGILKKIFGKDESEKYIKKITPIVQQINNLEPKISKLSDEELREKTDYFKILLAEGRSLDDILVEAFAVVREASRRTLD MRHFDVQLIGGYVLHKGAIAEMKTGEGKTLVATLALYLNALEGKGAHLVTVNDYLAKRDALWMGTIYLFLGLTVGVIQQN GSYLVEWDNKEKFTTKLVPCERVDAYAADITYGTNNEFGFDYLRDNMKYSLEDYCQKNLNFAIVDEVDSILIDEARTPLL ISGPTESSVEIYYHIDKVVRNLSKDTDYTVNEKDKIVKLTYEGISKIEKIMNIENLYDAKNIDLLHYINNSLKAHNLFHK DVDYVVQNSQVVIVDEFTGRLMPGRRYSDGIHQAIEAKEGVKIESENQTLASITFQNFFRMYKKLAGMTGTAATEAQEFM EIYGLKVVPIPPNRPMIRVDHPDQIYKTAKEKYDAILKEIIEMHKKGRPVLVGTVSIDKSEYLSKLLSKKLVPHQVLNAK HHEKEASIIANAGAKGAVTIATNMAGRGTDIKIKEEVKNLGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLE DDLLRIFGSEKISFIMDKLGMKEGEPIEHPLINKAIENAQKKVEGLHFEIRKHLLEYDNVMNQQRQIVYGLRKSILSDEE IEQVIVEEIHNLADIMIEDYILSPETPDYDGLKMEIEKVFDITVDELPDANRKNTSPLKEKIISLALKKLDEKKELLGEH FAPVIRFVMINTLDSKWKEHLLTMDHLRDSVGLRGYGQKDPLIEYKKESFNIFTDMMRRIYYETTELVYHVQLKSEEDIE LKEGKKQKMKEEKKDIFSDEPSEEKGTPIKRETPKIGRNDPCPCGSGKKYKKCCGSDGSTSDTEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 1e-119 | 41 |
