Gene Information

Name : Calni_0179 (Calni_0179)
Accession : YP_004050255.1
Strain : Calditerrivibrio nitroreducens DSM 19672
Genome accession: NC_014758
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : 1.20.4.1
Position : 178078 - 178512 bp
Length : 435 bp
Strand : +
Note : COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: ddf:DEFDS_1452 arsenate reductase (glutaredoxin); PFAM: Protein-tyrosine phosphatase, low molecular weight; PRIAM: Protein-tyrosine-phosphatase; SMART: Protein-tyrosine phosphatase, low

DNA sequence : 
ATGGGGTGTAATAATATGATGAAAAAAAATCTTCTTTTTTTATGTACTGGGAATTCATGCAGAAGCCAGATGGCAGAGGG
GTATGGCAGGATCTATTTGGGGGATAGGTACAATGTTTATTCCGCTGGGACGGAGAAACATGGTCTAAACCCATATATGG
TAAAAGTGATGGAAGAGGATGGGGTGGATCTCTCAAACCATTATTCTAAGACAGTTTCGGAACTTAAAGATATCGACTTT
GACATAGTGGTTACGGTTTGTGGGGATGCCAATGAAAGATGCCCTGTCTATTTGAAAAGGGGAAAACTTATCCACAAAGG
TTTTGAAGATCCTGCAAAGTTTCAAGGGGATGAAGAAGAAAAGCTTGAATTTTTCCGGAAGATAAGGGATCAGATTAAAA
ATTATATAAAAAACTATTTGAGTAATGAAGTTTGA

Protein sequence : 
MGCNNMMKKNLLFLCTGNSCRSQMAEGYGRIYLGDRYNVYSAGTEKHGLNPYMVKVMEEDGVDLSNHYSKTVSELKDIDF
DIVVTVCGDANERCPVYLKRGKLIHKGFEDPAKFQGDEEEKLEFFRKIRDQIKNYIKNYLSNEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 1e-22 46
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 6e-23 45
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 8e-22 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calni_0179 YP_004050255.1 protein tyrosine phosphatase BAC0581 Protein 5e-31 53
Calni_0179 YP_004050255.1 protein tyrosine phosphatase BAC0580 Protein 6e-23 48
Calni_0179 YP_004050255.1 protein tyrosine phosphatase BAC0032 Protein 2e-22 47