Gene Information

Name : Calni_1585 (Calni_1585)
Accession : YP_004051656.1
Strain : Calditerrivibrio nitroreducens DSM 19672
Genome accession: NC_014758
Putative virulence/resistance : Virulence
Product : l-glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1634518 - 1635930 bp
Length : 1413 bp
Strand : +
Note : COGs: COG0174 Glutamine synthetase; InterPro IPR008147: IPR008146: IPR001637: IPR004809; KEGG: ddf:DEFDS_1474 glutamine synthetase type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: Glutamine synthetase; TIGRFAM: g

DNA sequence :
ATGACACCCAAAGAAGTTTTAAAGCTCATTGAAGAGCAAAATATTAAGTTTGTGGATTTAAGATTCGTGGATTTTTTCGG
TTTGTGGCAGCATTGTTCCTATCCAGTATCTATGTTTGATGAGGATACTTTTGAGGATGGGCTTGGATTTGATGGATCAA
GTATTAGAGGTTGGCAAGCCATCAACAATAGTGACATGCTCATTATACCTGATCCAACCACAGCAAAAATCGATCCTTTT
ACTCAGGTTCCCACATTAATAATGCTTTGTAAAATAGTAGATCCTATAACAAAAGAGCCTTATTCAAGGGATCCAAGAAA
CATCGCCATTAAAGCCACCAATTATCTTAAAGGTACAGGTATTGCCGACACAGCTTTTTTTGGGCCTGAACCTGAATTTT
TCATTTTTGATGATGTAAGGTATGCCTGCACCCCAAATGAGAGTTTTTACTCATTCGATTCAATAGAAGGGATCTGGAAT
ACTGGTAGAGATGAAGCCCCAAACCTTGGTTATAAAATTAGACACAAAGAAGGGTATTTCCCTGTACCACCCCATGACTC
ACTCATGGATTTGAGAGCAGAAATGGCTCTTGCGCTTATGAAACTTGGCATTGAAGTTGAAGCCCACCATCATGAAGTAG
CCTCTGCTGGCCAGGTGGAGATTGATATTAAGTTTGCTCCATTAGTTGATCAGGCAGATAATTTGATGTTCTATAAGTAT
GCTGTTAAGAATGTTGCAAAGCTTCACAACAAAGTAGTTACTTTTATGCCTAAACCGATGTTTGGTGATAACGGTAGTGG
TCTTCATTGTCACCAATCTCTCTGGAAAGATGGGAAACCACTTTTCGCAGGCGATGAATATGCTGGTTTGAGTGAACTTG
CTCTTTATTATATCGGTGGTATTATAAAACATGCCAAGGCTATAGCAGCGTTTACCAATCCAATCACAAACTCTTATAAA
AGACTTGTACCCGGATATGAGGCTCCAGTGAATCTCGCCTATTCATCAAGGAACAGAAGTGCCTCCATTAGAATCCCAAT
GTATTCCGCTTCTCCAAAATCCAAAAGGATCGAAGTGAGATTCCCTGATCCATCCTGCAATCCATATCTTGCATTTACCG
CTATGCTCATGGCAGGGCTTGATGGTATAGAAAATAAAATAGACCCAGGTGAACCTATGGATAAAAACCTATACGATCTG
GATCCAATCGAACTTTCAAATATACCAAAAATGCCAGGTTCTCTGGAAGAAGCCCTTGATTCACTCGAAAAAGATCATGA
ATTCCTTCTTAAAGGAGATGTATTTACTGAAGATGTCATATCCACCTGGATAGCATACAAAAGACAGAATGAAGTGGCTG
CAGTCAACATGAAACCGCATCCAATGGAATTCATGTTATATTTCGACTGTTAA

Protein sequence :
MTPKEVLKLIEEQNIKFVDLRFVDFFGLWQHCSYPVSMFDEDTFEDGLGFDGSSIRGWQAINNSDMLIIPDPTTAKIDPF
TQVPTLIMLCKIVDPITKEPYSRDPRNIAIKATNYLKGTGIADTAFFGPEPEFFIFDDVRYACTPNESFYSFDSIEGIWN
TGRDEAPNLGYKIRHKEGYFPVPPHDSLMDLRAEMALALMKLGIEVEAHHHEVASAGQVEIDIKFAPLVDQADNLMFYKY
AVKNVAKLHNKVVTFMPKPMFGDNGSGLHCHQSLWKDGKPLFAGDEYAGLSELALYYIGGIIKHAKAIAAFTNPITNSYK
RLVPGYEAPVNLAYSSRNRSASIRIPMYSASPKSKRIEVRFPDPSCNPYLAFTAMLMAGLDGIENKIDPGEPMDKNLYDL
DPIELSNIPKMPGSLEEALDSLEKDHEFLLKGDVFTEDVISTWIAYKRQNEVAAVNMKPHPMEFMLYFDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-98 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calni_1585 YP_004051656.1 l-glutamine synthetase VFG1399 Protein 2e-129 58