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Name : Calni_1438 (Calni_1438) Accession : YP_004051509.1 Strain : Calditerrivibrio nitroreducens DSM 19672 Genome accession: NC_014758 Putative virulence/resistance : Virulence Product : 3-deoxy-d-manno- octulosonatecytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 1501748 - 1502479 bp Length : 732 bp Strand : - Note : COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; InterPro IPR003329: IPR004528; KEGG: dap:Dacet_1303 3-deoxy-D-manno-octulosonatecytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-manno-octulosonate cytidylyltrans DNA sequence : ATGAGTGCAGCAGTAGTTATTCCCGCAAGGTATGCTTCCACAAGACTCGAAGGTAAGCCTTTAAAAGAGATAGCAGGGAT TCCTATGATAGTGTGGGTGGCCCAGAATTGCAAGAAGAGCAAAGCTAATAGGGTCATTGTAGTTACAGATGATACAAGAA TCTTAGATGAATGCAAAAAAATAGATGGGATTGAAGTTACGATGAGCGACCCTAATCTCCCATCAGGTACTGACAGGGTG GCAAAAGTGGCCAGGTTTTTAGATGACGATATTATTATAAATGTTCAGGGAGATGAGCCTTTTATCGATTATAAGGTGAT CGATATGCTTATAGATGATCTAAAAAGTTCTGATGCTGTTATGAACACCGCATGTGTTAAAATAGATGAAACAACAGCAC AAAATCCGAATGTAGTAAAGGTTGTGTTTGATAAAACAGGTTATGCGTTATATTTTTCCAGATCACCGATTCCTTACTAT AGAGATAAGGATGAACAGAAATTTTTTTACAAACATATCGGTATATATGGTTATAGAAGGAGTTTTCTGAAGGTATTTAA CTCTCTTGAACCATCGGTGCATGAGAGTATCGAAAAGCTTGAGCAATTAAGGGCACTTGACAATGGCTACAAAATAAAGG TAATAGAAACTGATTACAACGGCATTTCTGTGGATACGGAAGAAGATTTAATAAAGGCAAATAAGTATGCAATGGAGATA TTAAATGGCTAA Protein sequence : MSAAVVIPARYASTRLEGKPLKEIAGIPMIVWVAQNCKKSKANRVIVVTDDTRILDECKKIDGIEVTMSDPNLPSGTDRV AKVARFLDDDIIINVQGDEPFIDYKVIDMLIDDLKSSDAVMNTACVKIDETTAQNPNVVKVVFDKTGYALYFSRSPIPYY RDKDEQKFFYKHIGIYGYRRSFLKVFNSLEPSVHESIEKLEQLRALDNGYKIKVIETDYNGISVDTEEDLIKANKYAMEI LNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-33 | 42 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 1e-33 | 42 |
| unnamed | AAK15335.1 | unknown | Not tested | Not named | Protein | 2e-29 | 42 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-34 | 41 |
