|
Name : Calni_1332 (Calni_1332) Accession : YP_004051403.1 Strain : Calditerrivibrio nitroreducens DSM 19672 Genome accession: NC_014758 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein flip Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 1387470 - 1388204 bp Length : 735 bp Strand : - Note : COGs: COG1338 Flagellar biosynthesis pathway component FliP; InterPro IPR005838: IPR005837; KEGG: ddf:DEFDS_1714 flagellar transport protein FliP; PFAM: type III secretion system inner membrane P protein; SPTR: Flagellar transport protein FliP; TIGRFAM: f DNA sequence : ATGTTGGTTTTACTTACTGTCTTGCTCTTTGTACCTTTATCCTATGCCGCAGACCCTATCCCTCTGCCTGCGTTTAGATT TGGTGTGGAAGGGGCCACAGCCCCAAAAGATGTGGCTGTCACGCTGCAAATAATTTTTCTTATAACCATTCTTTCAATTG CTCCTGCTATTTTGATTATGATGACATCTTTTACAAGGATAATTATAGTTTTTTCTTTTTTGCGGAGTGCAATGGGGACA CAACAAACCCCTCCAAATCAGGTTTTAATAGGTCTTGCTCTATTTTTGACATTTTTTATTATGTCGCCAGTATTTTCTGA AATGAATAAAAATGCCCTTGCCCCGTATCTGGATGGTAAAATTGCTTTCACGGATGCTTTAAAAGAGGCCAAAAAGCCTT TGAGGAAGTTTATGCTTGAAAACACTAGAAAGAAGGATATCATGACATTCCTTCAGGTATCAAAATCTCCTATGCCAAAA ACTGTGGATGATATCCCTGATATGGTTTTGTTGCCTGCTTTTGTCACAAGTGAACTACAGACGGCATTCGAAATTGGATT TTTACTTTTTTTGCCATTTTTAATAATTGACTTTGTGGTTTCAAGTGTTTTGCTTTCTATGGGGATGATGATGCTTCCTC CTGTGATGATTTCAATGCCATTTAAAATTTTGCTGTTTGTTCTGGTTGATGGTTGGAATCTAATAGTGATGTCACTTGTA AAAAGTTTTATGTAG Protein sequence : MLVLLTVLLFVPLSYAADPIPLPAFRFGVEGATAPKDVAVTLQIIFLITILSIAPAILIMMTSFTRIIIVFSFLRSAMGT QQTPPNQVLIGLALFLTFFIMSPVFSEMNKNALAPYLDGKIAFTDALKEAKKPLRKFMLENTRKKDIMTFLQVSKSPMPK TVDDIPDMVLLPAFVTSELQTAFEIGFLLFLPFLIIDFVVSSVLLSMGMMMLPPVMISMPFKILLFVLVDGWNLIVMSLV KSFM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 3e-12 | 45 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 3e-12 | 45 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 3e-12 | 45 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-14 | 43 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 1e-14 | 43 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 5e-14 | 43 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 5e-14 | 43 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-14 | 43 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 2e-12 | 43 |
| unnamed | AAL06354.1 | EscR | Virulence | LEE | Protein | 1e-11 | 43 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 8e-14 | 42 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 2e-13 | 42 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 1e-11 | 41 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 2e-11 | 41 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 1e-11 | 41 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 2e-11 | 41 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 1e-11 | 41 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 2e-11 | 41 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 1e-11 | 41 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 2e-11 | 41 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 1e-11 | 41 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 1e-11 | 41 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 1e-11 | 41 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 7e-11 | 41 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 6e-12 | 41 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 6e-12 | 41 |
| hrcR | AAB06005.2 | HrcR | Virulence | Hrp PAI | Protein | 3e-13 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Calni_1332 | YP_004051403.1 | flagellar biosynthetic protein flip | VFG2016 | Protein | 1e-38 | 58 |
| Calni_1332 | YP_004051403.1 | flagellar biosynthetic protein flip | VFG1259 | Protein | 2e-36 | 55 |
| Calni_1332 | YP_004051403.1 | flagellar biosynthetic protein flip | VFG2338 | Protein | 7e-32 | 53 |
| Calni_1332 | YP_004051403.1 | flagellar biosynthetic protein flip | VFG2494 | Protein | 3e-33 | 52 |
| Calni_1332 | YP_004051403.1 | flagellar biosynthetic protein flip | VFG0519 | Protein | 6e-15 | 43 |
| Calni_1332 | YP_004051403.1 | flagellar biosynthetic protein flip | VFG0044 | Protein | 8e-12 | 42 |
| Calni_1332 | YP_004051403.1 | flagellar biosynthetic protein flip | VFG0394 | Protein | 1e-12 | 42 |
| Calni_1332 | YP_004051403.1 | flagellar biosynthetic protein flip | VFG0715 | Protein | 7e-12 | 41 |
| Calni_1332 | YP_004051403.1 | flagellar biosynthetic protein flip | VFG0827 | Protein | 8e-12 | 41 |
| Calni_1332 | YP_004051403.1 | flagellar biosynthetic protein flip | VFG0188 | Protein | 3e-14 | 41 |
