Gene Information

Name : Calni_0128 (Calni_0128)
Accession : YP_004050205.1
Strain : Calditerrivibrio nitroreducens DSM 19672
Genome accession: NC_014758
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 123886 - 124491 bp
Length : 606 bp
Strand : -
Note : COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: saf:SULAZ_0356 sugar transferase; PFAM: sugar transferase; SPTR: Sugar transferase; PFAM: Bacterial sugar transferase

DNA sequence : 
ATGTATAGATATTTTGGCAAGCGTCTGATGGATATAATATTTTCAACATTGGCAATCTTACTACTCCTACCATCTTTTTT
TATCATTGCATTACTGATAAAGCTCGATACAAATGGTCCGATATTTTATCGACAGATCAGGATGGGTAAAGATTTTAAAC
CGTTTGGACTTTACAAATTCCGCACCATGGTGGTGGATGCCGATAAGATGGGCCCCCTTGTTACCAAAGATAGAGATCCC
CGTATCACAAAAGTGGGTTATTACTTAAGAAAATGGAAATTAGATGAGCTCCCTCAATTTTTCAACGTTTTAAAAGGGGA
TATGAGTCTTGTGGGACCAAGGCCGGAGGTGGAAAAATATGTTAAACTATACAAAGATGATTACACCATAGTATTGACAG
TTAAACCAGGGATAACCGATTATGCTACGATACTATTTCGGGATGAAGAGGATCTTATAGCCCGGTTTGATGATGTTGAA
AAGGGGTATACCCAGGTGATCCTGCCCAAAAAGATTGAGCTTTATAAGAAATATATCGATGATATCTCATTTTTTACAGA
TATAAAATTATTATATTTGACTTTTTTAAAAATATTTAGAATATAA

Protein sequence : 
MYRYFGKRLMDIIFSTLAILLLLPSFFIIALLIKLDTNGPIFYRQIRMGKDFKPFGLYKFRTMVVDADKMGPLVTKDRDP
RITKVGYYLRKWKLDELPQFFNVLKGDMSLVGPRPEVEKYVKLYKDDYTIVLTVKPGITDYATILFRDEEDLIARFDDVE
KGYTQVILPKKIELYKKYIDDISFFTDIKLLYLTFLKIFRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 2e-20 47
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 4e-21 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calni_0128 YP_004050205.1 sugar transferase VFG0032 Protein 8e-37 47
Calni_0128 YP_004050205.1 sugar transferase VFG1309 Protein 9e-21 41