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Name : Calni_0125 (Calni_0125) Accession : YP_004050202.1 Strain : Calditerrivibrio nitroreducens DSM 19672 Genome accession: NC_014758 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein capd Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 118041 - 119861 bp Length : 1821 bp Strand : - Note : COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: ppd:Ppro_3385 polysaccharide biosynthesis protein CapD; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Polysaccharide biosynthesis protein CapD; PFAM: Oxidoreductase fa DNA sequence : ATGAACGTAAAAAAAGTTGTGGCGGTAGTTTTATTCATATCTATCGCCATCTTTTCCATATATGTATCGTATCTTTTAAG ATTTGAATTTAATATCCCGGATGACTTTTTCAACGAACTTGTAAAACATCTACCGTTAATAGTATTCACAAAGCTTTTAG TATTCTGGTATTTCAATTTTTTCAGAGGTTGGTGGAGGTTTGTATCTATCTATGATGCTTTAAATATAATCCGTTCAAGC TTTATATCAACCTTTTTTATAATGGTTTACCTATACCTGATCTACGGTTTCTACAAAATGCCACGATCTGCGTTCATTAT AGATCTTTTACTTTTTACGATCCTTATATTCATTTTAAGGGTTTCCCCGAGGCTTTTTAAAGAAAGTTATGGTAAATTTT TAGGGGAAAAAGTCACCAAAAAGAGGGTGCTGATAGTGGGGGCCGGAAGTGCAGGACAGATGATAGCAAGGGAGATAAAA GATAACGACAAATTACATGCTGAAGTGGTGGGGTTTGTGGATGATGACGAAAGAAAGATTAAAACAAGAATCCTTGGAAT ACCTGTAATAGGTTCCACCAAAGAGATCCCTATAATAGCTAAGGATGATGAGATAGATGAAATAGTAATTGCAATCCCCT CCGCAAGTAAAGAAGAGATGCAAAGGATCGTTGAAAAATGTCGGGAAGCCGCTGTGGGATATAAGATTATACCGGGGTTT GGAGAGATACTTGAAGGTAAACTTTCTGTAAATAGGATAAGAGATGTTGAGATTGAAGACCTGCTCGGGCGCCCACCCAT TAAGCTCAAACTTGCTGAAATCGAACAATACCTCAAGGATAAAGTAGTACTTGTGACTGGTGCTGGTGGCAGTATTGGTG GGGAGATTGCAAGACAGGTATCCAGATACTCCCCCAAAAACCTTATAATTCTGGATATAGCAGAAACTCCCCTCTTTTTT ATAGAAAATTATCTGAAATCCAGTAAAAATGATTTAAATCTAACAACCATCATCGGCGATGTAAAGAATATTGTTAAGAT GGAACAGCTTTTTAAATCTTACAAACCTGATATTGTAATACATGCTGCAGCCTATAAACATGTCCCAATGATGGAATTAA ATCCAGACGAAGCGATATGGAATAATATATTCGGCACAAAGGTAATAGCTGATCTATCGTGTAAATATGAAGTGGATAAA TTTATACTGATATCCACAGATAAAGCCGTAAACCCCACAAATATAATGGGGGCAACCAAAAGAATTGCTGAGCTTTACAT AAAAACATTCCCGGATGATCTAAAGACAAAGTTTATCATAGTGAGATTTGGAAATGTCCTTGGAAGCAATGGATCTGTGA TACCTATATTCAAAGAGCAGATAAAAAATGGTGGCCCCGTCACAGTCACCCATCCTGAGGTCACAAGATATTTCATGACG ATACCTGAGGCGGTTCAACTGGTACTACAGGCGGGGGGTATCGGCAAAGGGGGTGAACTATTTCTACTTGATATGGGAGA ACCTGTAAAGATCCTCAAACTTGCAGAAGAGATGATAAGACTTTCAAATTTTGAACCATATAAAGAGATAGACATCGTAT TCACAGGATTAAGACCTGGAGAAAAGCTCTACGAAGAGCTTTTATTGGATGAAGAGGGGAGCACGAAAACTGAATATGAT AAGATATGGATAGCAAAACAGCAACCTATTGACAAGGATATAGTATTAAACGTCATAAATGATCTTCTGGAAAAAAGTGG AAGTTTAAATCTATCAGAGATCAAAGATATTATGAGAAGATTAATACCAACTCTAAAGTAA Protein sequence : MNVKKVVAVVLFISIAIFSIYVSYLLRFEFNIPDDFFNELVKHLPLIVFTKLLVFWYFNFFRGWWRFVSIYDALNIIRSS FISTFFIMVYLYLIYGFYKMPRSAFIIDLLLFTILIFILRVSPRLFKESYGKFLGEKVTKKRVLIVGAGSAGQMIAREIK DNDKLHAEVVGFVDDDERKIKTRILGIPVIGSTKEIPIIAKDDEIDEIVIAIPSASKEEMQRIVEKCREAAVGYKIIPGF GEILEGKLSVNRIRDVEIEDLLGRPPIKLKLAEIEQYLKDKVVLVTGAGGSIGGEIARQVSRYSPKNLIILDIAETPLFF IENYLKSSKNDLNLTTIIGDVKNIVKMEQLFKSYKPDIVIHAAAYKHVPMMELNPDEAIWNNIFGTKVIADLSCKYEVDK FILISTDKAVNPTNIMGATKRIAELYIKTFPDDLKTKFIIVRFGNVLGSNGSVIPIFKEQIKNGGPVTVTHPEVTRYFMT IPEAVQLVLQAGGIGKGGELFLLDMGEPVKILKLAEEMIRLSNFEPYKEIDIVFTGLRPGEKLYEELLLDEEGSTKTEYD KIWIAKQQPIDKDIVLNVINDLLEKSGSLNLSEIKDIMRRLIPTLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-84 | 49 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-86 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Calni_0125 | YP_004050202.1 | polysaccharide biosynthesis protein capd | VFG1300 | Protein | 8e-89 | 48 |
