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Name : Calni_0104 (Calni_0104) Accession : YP_004050182.1 Strain : Calditerrivibrio nitroreducens DSM 19672 Genome accession: NC_014758 Putative virulence/resistance : Unknown Product : primary replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 100046 - 101377 bp Length : 1332 bp Strand : + Note : COGs: COG0305 Replicative DNA helicase; InterPro IPR007694: IPR007692: IPR007693; KEGG: ddf:DEFDS_0034 replicative DNA helicase DnaB; PFAM: DnaB domain protein helicase domain protein; SPTR: Replicative DNA helicase DnaB; TIGRFAM: replicative DNA helicase DNA sequence : ATGAGCAGCAATAACTTTAAGACATTACCCCATAGTGTTGAAGCCGAACAGGCTGTTATAGCATCGATATTAATTGATAG TAGATCTCTGGATAGGATTATACATATCATAAATGTAGATGATTTTTATATTCCCTACAATAGGTTGCTAATGCAGAAGA TGTTTGAATTGCATGAGGAAGGTAGGGCAATAGATCTGGTGACTTTAGCAGAAAGATTGATTACTGAGAATCTAATCGAA AAGGCTGGTGGTATGGAATATATCTCAGCCTTAGTGAATATATTGCCAAACGCCGCCAATGTTGTGCACTATGCAAATAT TGTGAGGGAAAAAAGCCTCCAGAGGAAACTAATCGAACGGTCTGTGGAAATATCTGAAATGGCTTATGGTTATACCGGGG ATCTGAATGAGCTTCTGGATGAAGCAGAGAGGAAGATATTCGCGATTGCGGAATCCAGAATTAGAGGGGATATAAAACCG ATAGGTAATATTATAAGTCATACCTTTGAAATTATAGAATCGTTGTATCATAGACAGGGGCAGATCACCGGAACCCCCAC TGGATTTGTTGATTTAGATAGAATTACCAATGGGCTTCAGAAATCGGATCTTATCATTGTGGCGGGTAGACCCGCAATGG GTAAAACTGCATTTGCCCTCAATATAGCTCTTAATGCTTGTGTAAAATACAATAAAGTGATTGCGATGTTTTCCCTTGAA ATGTCTTCTGGTCAGCTTGTGCAGAGGCTTTTATCTGCGGAAGCAAATATCGAGTCCCAAAAATTGAGAAATGGTAGACT TTCCATGGATGAGTGGCAGAGGTTGGCTTCTGTGGCTGGAGAACTCAATGAGATACAATTTTACATTGATGATACCCCTG CCATATCCGTTACGGAGGTGAGGGCAAAATCCAGAAGGATAAAAAGGGAAAAGGGGCTTGATCTTGTTATAATAGATTAT CTTCAGCTTATGAGTAGCAACAAAGGAGAAAGTAGAGAGCAACAGATCTCCGAGATTTCCAGATCTCTTAAAGCTCTTGC CAAGGAGCTAGATGTGCCGGTGATTGCACTTTCTCAGCTTAATAGAAGTGTAGAAAATAGGCAGGACAAAAGGCCTGTAC CATCAGATTTAAGGGAGTCTGGTGCCATTGAACAGGATGCTGACATCATAATATTCCTCTACAGAGATGAGGTTTATAAT AAAGATACGAAAAAACCTGGTGTGGCGGAGATAATAATAGCCAAACATAGAAATGGTCCCACAGGAACAGTGGAGCTTGC TTTCCTTAAAGAATTTACAAAATTTGCCAACCTTGAGCATTCAGCTGTATAA Protein sequence : MSSNNFKTLPHSVEAEQAVIASILIDSRSLDRIIHIINVDDFYIPYNRLLMQKMFELHEEGRAIDLVTLAERLITENLIE KAGGMEYISALVNILPNAANVVHYANIVREKSLQRKLIERSVEISEMAYGYTGDLNELLDEAERKIFAIAESRIRGDIKP IGNIISHTFEIIESLYHRQGQITGTPTGFVDLDRITNGLQKSDLIIVAGRPAMGKTAFALNIALNACVKYNKVIAMFSLE MSSGQLVQRLLSAEANIESQKLRNGRLSMDEWQRLASVAGELNEIQFYIDDTPAISVTEVRAKSRRIKREKGLDLVIIDY LQLMSSNKGESREQQISEISRSLKALAKELDVPVIALSQLNRSVENRQDKRPVPSDLRESGAIEQDADIIIFLYRDEVYN KDTKKPGVAEIIIAKHRNGPTGTVELAFLKEFTKFANLEHSAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-79 | 43 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 5e-74 | 43 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 5e-74 | 43 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-77 | 42 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-76 | 42 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 5e-74 | 42 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 7e-73 | 42 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-67 | 41 |
