|
Name : Sulku_2744 (Sulku_2744) Accession : YP_004049947.1 Strain : Genome accession: NC_014755 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 61911 - 63029 bp Length : 1119 bp Strand : - Note : COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584: IPR017894; KEGG: sdl:Sdel_1999 integrase catalytic subunit; PFAM: integrase catalytic subunit; SPTR: integrase catalytic subunit; PFAM: Integrase core domain DNA sequence : GTGCTTATACCCGGAGAATATAGGATGATAAAGAAGTTAAAGAAGCAAGGGCTGAGCATCTCTCAGATTGCTCGACAAGT AGGGGCTTGCCGCAATACGGTAAAGAAGTATTTGCGATTACCCGATGGTGTACGACCAGTACAGGTTCGTCCCCCCAAAG GGAGTCAAGCTGATCCGTTTATCGGACTGGCGTATGAGATGATCGAAGCGGGTAAACGCTCAGGGGATATTATCCCCGCA TCATCGGTATATGAAGAGATCAAACGCCAAGGGTATACGGGAAGTCTTCGGACATTGCAACGCTCCATCGCTGCATGGGA ACTGCGTGCGGATACGGAGAAGAAAGCAGAACCGCTGATTCGGTTTGAAACCGAAGCGGGCATACAGATGCAAGTTGATT GGGTCGAGTTTCCCAAAGAGGGAATATCGGCGTTTGTGGCAACACTGGGATATTCACGAATGTCGTATGTCGAATACGTC AGTGACGAGAAAGTCGAGACGCTGATTGAGTGCCATAAAAATGCCTTTGAGTATTTCGGCGGTGTGGTTCGAGAGGGTCT GTATGACAACATGAAGAGTGTTATCCTTCAGCGCAACTATTACGGCAAGGGGAAACATCGGTTCCATCCATTGTTCCAAG ACTTCGCCAAACACTACGGGTTCGAGATCCGAATGTGTAGACCGTATCGGGCAAAAACCAAAGGGAAAGTAGAACGATTC AACCGCTATCTACGCCACAGCTTCCATCAGCCTCTCAAAGCGAAACTATTGCTCCGTTCCCTCACCCTAACCAAAGAGAT TGCCAACGCAGAAGTGGCTAAATGGCTGAACAGTGTAGCCAATACTCGTATCCACCAAAGCACCTTCGCCAAACCGATTG ATCTGTTAAAGGAAGTTGAACAAGATAAATTGATGAGCTTACCGTTTATCGATTACACCGTCGCAAGCTTGAGACTACAC GAAGAATTACAACTCGCCAACACCAAGCCCCAGCGTCCGATACCGACCAATACACTGACCCCTAAAAAGAAAAAGAGCAA AGAACCGCCAATATCATTGGATTACTATGATCTCTTGATCCCTACAGCGCTCCTCAGTGTTGTTAGGAGTATCGCATGA Protein sequence : MLIPGEYRMIKKLKKQGLSISQIARQVGACRNTVKKYLRLPDGVRPVQVRPPKGSQADPFIGLAYEMIEAGKRSGDIIPA SSVYEEIKRQGYTGSLRTLQRSIAAWELRADTEKKAEPLIRFETEAGIQMQVDWVEFPKEGISAFVATLGYSRMSYVEYV SDEKVETLIECHKNAFEYFGGVVREGLYDNMKSVILQRNYYGKGKHRFHPLFQDFAKHYGFEIRMCRPYRAKTKGKVERF NRYLRHSFHQPLKAKLLLRSLTLTKEIANAEVAKWLNSVANTRIHQSTFAKPIDLLKEVEQDKLMSLPFIDYTVASLRLH EELQLANTKPQRPIPTNTLTPKKKKSKEPPISLDYYDLLIPTALLSVVRSIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| y1094 | CAD42088.1 | OrfA protein of IS100 transposase | Not tested | PAI II 536 | Protein | 6e-51 | 44 |
| y1093 | YP_002346890.1 | transposase for insertion sequence IS100 | Not tested | HPI | Protein | 9e-51 | 44 |
| orfA | CAE85182.1 | OrfA protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 6e-51 | 44 |
| y2411 | NP_669718.1 | transposase | Not tested | HPI | Protein | 9e-51 | 44 |
| y1094 | CAC43410.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 6e-51 | 44 |
| YPTB1585 | YP_070113.1 | transposase | Not tested | HPI | Protein | 9e-51 | 44 |
| unnamed | CAA21403.1 | - | Not tested | HPI | Protein | 9e-51 | 44 |
| y1093 | CAD33720.1 | ORF A protein | Not tested | PAI I 536 | Protein | 1e-50 | 44 |
| unnamed | CAB46599.1 | IS100 transposase | Not tested | HPI | Protein | 6e-51 | 44 |
| api83 | CAF28557.1 | transposase | Not tested | YAPI | Protein | 6e-51 | 44 |
| s0035 | CAD33773.1 | ORF A protein | Not tested | PAI I 536 | Protein | 6e-51 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sulku_2744 | YP_004049947.1 | integrase catalytic subunit | VFG1626 | Protein | 3e-51 | 44 |
| Sulku_2744 | YP_004049947.1 | integrase catalytic subunit | VFG1607 | Protein | 3e-51 | 44 |
| Sulku_2744 | YP_004049947.1 | integrase catalytic subunit | VFG1461 | Protein | 8e-51 | 44 |
| Sulku_2744 | YP_004049947.1 | integrase catalytic subunit | VFG1514 | Protein | 3e-51 | 44 |
