Gene Information

Name : dnaB (NLA_13540)
Accession : YP_004048934.1
Strain : Neisseria lactamica 020-06
Genome accession: NC_014752
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : 3.6.1.-
Position : 1487336 - 1488748 bp
Length : 1413 bp
Strand : -
Note : -

DNA sequence :
ATGAACGATTACGCGGCTATGCCGTCTGAAGACGGAGGAATCGGCTCATTGTCGCTTCCGCCGCACTCAATGGAGGCGGA
ACAATCCGTTTTGGGCGGGCTGTTGCTGGAAAATCCGGCTTGGGACAGGATTGCCGATGTGGTGTCGGGAGAAGATTTCT
ACCGCCACGAACACCGCCTGATTTTCCGATCTGTTGCCAAACTGATTAATGAGAGCCGTCCTGCCGATGTGATTACGGTT
CAGGAAGATTTGCAGCGGAACGAAGAATTAGAAGCGGCAGGCGGATTCGAATATCTGATTTCCCTTGCGCAAAACACCCC
GTCTGCCGCCAACATCCGGCGTTATGCCGAAATCGTGCGCGAGCGTTCCATTATGCGCCAACTCGCCGAAGTGGGAACGG
AAATTGCCCGCAGCGCCTACAATCCGCAAGGCAGGGACGCGGGGCAGCTTTTGGACGAGGCGGAAAACAAAGTATTCCAA
ATTGCGGAAAGCACGGCCAAATCCAAGCAGGGCTTTTTGGAGATGCCCGATTTGCTGAAAGAAGTCGTACAGCGCATCGA
TATGCTTTATTCGCGCGACAATCCTGACGAAGTTACCGGCGTGCCGACAGGGTTTATCGACCTCGATAAAAAAACATCCG
GTCTTCAGCCCGGCGACCTGATTATCGTCGCCGGCCGCCCGTCTATGGGTAAAACCGCCTTTTCCATCAATATTGCCGAG
TATGTCGCCATTGAAAAACATTTGCCCGTCGCAGTTTTCTCGATGGAAATGGGCGGGGCGCAATTGGTAATGCGTATGCT
CGGTTCGGTCGGACGCTTGGATCAGAGCGTCCTGAAAACAGGCAGGTTGGAAGACGAACACTGGGGCCGTTTGAACGAAG
CGGTCGTCAAACTTTCCGATGCGCCTATGTTTATCGACGAAACCCCGAATCTGACCGCCCTCGAGCTGCGCGCCCGCGCA
CGCCGCCTCGCCCGCCGGTTTGACGGCAGATTAGGTTTGATCGTCATCGACTACCTGCAACTGATGGCGGGATCCGGCCG
TTCGGACAACCGCGCTTCCGAGCTGGGCGAAATTTCCCGCTCCCTCAAAGCCCTGGCAAAAGAGTTGCAAGTCCCCATCA
TTGCCCTGTCGCAATTGAGCCGCACTGTCGAACAGCGCACCGACAAACGCCCGATGATGTCCGACTTGAGGGAGTCGGGC
GCAATCGAGCAGGATGCCGACCTGATTATGTTTATGTACCGCGACGAATACTATAACCAAGAATCGGAGATGAAGGGTTT
TGCGGAATGCATCATCGGCAAACACCGCAACGGCCCGGTCGGAAAAGTCATCCTGACTTGGATGGGGCAGTTTACCAAAT
TCGGAAATGCCGCCTATATCCCGGAATCGGCGGCGGAAGGCCGAACGGCATAA

Protein sequence :
MNDYAAMPSEDGGIGSLSLPPHSMEAEQSVLGGLLLENPAWDRIADVVSGEDFYRHEHRLIFRSVAKLINESRPADVITV
QEDLQRNEELEAAGGFEYLISLAQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQ
IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVPTGFIDLDKKTSGLQPGDLIIVAGRPSMGKTAFSINIAE
YVAIEKHLPVAVFSMEMGGAQLVMRMLGSVGRLDQSVLKTGRLEDEHWGRLNEAVVKLSDAPMFIDETPNLTALELRARA
RRLARRFDGRLGLIVIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVEQRTDKRPMMSDLRESG
AIEQDADLIMFMYRDEYYNQESEMKGFAECIIGKHRNGPVGKVILTWMGQFTKFGNAAYIPESAAEGRTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 5e-91 50
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 8e-83 47
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 6e-82 46
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-82 46
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 3e-80 45
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-80 45
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 7e-79 44
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 7e-79 44
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 2e-68 41