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Name : lysS (NLA_5220) Accession : YP_004048150.1 Strain : Neisseria lactamica 020-06 Genome accession: NC_014752 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 510148 - 511659 bp Length : 1512 bp Strand : + Note : - DNA sequence : ATGAGCGAACAAAACCATCCGCAAACCGAGCCGCAGTTGGACGAAAACCAAATCATCGCCCTGCGCCGTGAAAAACTGCA CAACATCCGCCAACAGCGCAACGCCTACCCTAACGATTTCAAACGCGACAGCTTTGCCGCCGATTTGCACGCCCAATACG GCGAAATCGGCAAAGAAGAACTCGATCCGCAAGGCATTCCCGTCAAAGTGGCCGGCCGCATGATGCTCAAACGGCAAATG GGCAAGGCGAGTTTTGCCACCATTCAAGACGTGTCCGGACAAATCCAGCTTTATCTGAACAACAAAGGCGTGAGTCAGGA AGTTTTGGACGATTTCAACCATTGGGACTTGGGCGACATCGTCGGCGCGGAAGGCACTTTGTTCAAAACCAACCACGGCG AATTGACCGTGCGCGTATCCGACATCCGCCTGCTGTCCAAATCCCTGCGCCCTCTGCCCGACAAACACAAAGGCTTGAGC GATCAGGAAACCAAATACCGCCAACGCTACGTTGATTTGATTGCCAACGAAGAATCGCGCAATACCTTTATCAAACGCAG CCAAATCATCCAATCCGTGCGTAATTTTATGGTGGGCGAGCATTATCTCGAAGTCGAAACCCCGATGATGCACCCGATTC CCGGCGGCGCGACGGCGAAACCCTTCGTTACCCATCACAATGCTTTGGACATCCCGCTCTACCTGCGCATCGCCCCCGAG CTGTATCTGAAACGCCTGGTGGTCGGCGGTTTGGAACGCGTGTTTGAAATCAACCGCAGCTTCCGCAACGAAGGTATGTC CGTGCGCCACAACCCCGAATTTACGATGATTGAATTTTACGAAGCCTTCTCCGACTACGAACGCATGATGCAGATGGCGG AAGACATCATCCGCAATGCATCGCGCACGGTAAACGGTACGGCAAACATCACTTATAACGGCAAAGAAGTCGATTTGGAA AGCCCGTTCGAACGCCTGACCATCCTCGAAGCCATCAAAAAATATAATCCGCACTACACCGACGAGCAGTTGAACGATGC GGAATGGCTGAAAAAAGAAATCGTCAAACACGGCGAAAGCCTGCCGCCGTCTCCAGGCATCGGCAGCCTGCAACTCGCCC TGTTTGAAGGTTGTGCCGAGGGCAAATTGTGGAACCCGACCTTTATCGTCGATTATCCGGTTGAGGTTTCCCCGTTGGCA CGCGCTTCCGATACCAAACAAGGTCTGACCGAACGTTTCGAATTGTTCGTTGTCGGGCGCGAACTGGCAAACGGTTACTC TGAGTTGAACGACCCCGAAGACCAAGCCGAACGCTTCAAAGCGCAAGTGGCACAAAAAGATGCCGGCGACGACGAAGCGA TGCACTACGATGCCGACTACATCCGCGCCATGGAATTCGGCCTGCCGCCGACCGGCGGTTGCGGCATCGGTATCGACCGC TTAGTGATGCTGCTGACCGATTCGCAAACCATCCGCGATGTGATTCTGTTTCCGCAGATGCGTCCCGAGTAA Protein sequence : MSEQNHPQTEPQLDENQIIALRREKLHNIRQQRNAYPNDFKRDSFAADLHAQYGEIGKEELDPQGIPVKVAGRMMLKRQM GKASFATIQDVSGQIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFKTNHGELTVRVSDIRLLSKSLRPLPDKHKGLS DQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPE LYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLE SPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIVDYPVEVSPLA RASDTKQGLTERFELFVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDR LVMLLTDSQTIRDVILFPQMRPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-125 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004048150.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-126 | 52 |
