Gene Information

Name : rplS (MSB_A0564)
Accession : YP_004047305.1
Strain : Mycoplasma leachii PG50
Genome accession: NC_014751
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 655395 - 655787 bp
Length : 393 bp
Strand : -
Note : identified by match to protein family HMM PF01245; match to protein family HMM TIGR01024

DNA sequence :
ATGAGTTCAAAAGCAACAAAAACTGTTAAATCAAAATTTGATATCATAAATAATCAATTACGTGATGATTTAATAGATTT
TAGATCAGGAGACACTATTAGAGTTGATGTAAAAATTAAAGAAGGAGACAAATTCCGTATTCAATCTTTTGAAGGATTAG
TTATTAAAACTCAAGGATCAGGAATTACTTATTCTGTAGTTGTTAGAAAAATGTCAAATGGTGTATTTGTTGAAAGAACT
TTTCCTTTACACTCACCAATTATTGACTCAGTTACTTTAATTAAACGTGGTAAAGTTAGAAGATCTCGTATTTACTACAT
TAGAAAACTTTCTGGTAAAGCTGCTAGAATTAAAGAAATTATGCCAACAAAACAAGCTAAAGAAATCAAATAA

Protein sequence :
MSSKATKTVKSKFDIINNQLRDDLIDFRSGDTIRVDVKIKEGDKFRIQSFEGLVIKTQGSGITYSVVVRKMSNGVFVERT
FPLHSPIIDSVTLIKRGKVRRSRIYYIRKLSGKAARIKEIMPTKQAKEIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 5e-26 58
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 1e-20 49