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Name : Riean_0960 (Riean_0960) Accession : YP_004045627.1 Strain : Riemerella anatipestifer ATCC 11845 Genome accession: NC_014738 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1042808 - 1044076 bp Length : 1269 bp Strand : - Note : COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR018156: IPR002317: IPR015866: IPR002314: IPR 006195; KEGG: fba:FIC_00139 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligas DNA sequence : ATGTTACAAGTTCAATTTTTAAGAGAGCAAAAAAGCCGTGTTTTAGAAGGGCTTAAAAAGAGAAATTTTAAGGAGCTAAA CCTTGTAGATGAGGCAATAGCGACTGATGACGAAAGAAAGAAAATACAGTATGAGTTAGATGAAAATCTAGCTCAAATGA ATAAAATATCCAAAGAGATAGGGCTTCTAATGAAGGAAGGAAAGAAGCAAGAAGCAGAGGAGGCTAAAACTAAAACAGGA GAGTTTAAGCAGAAATCACAGGATTTACAACAGTTGTTAAAAGAAAAAGAGGAGTCTCTACTGAATATTCTTTATCAAAT CCCAAATATACCAGCAGATATTGTAAAAGCGGGTAGTTCGGCAGATGATAATGAGGTGGTGTATCAGTCTTGTGATACTT TTGAGATGGGAACAGAGGCTTTGCCACACTGGGAACTTGCTAAAAAATACAATCTAATTGATTTTGAATTGGGTGTAAAG ATAGCAGGGGCAGGTTTTCCAGTTTATTTAGGTAAAGGAGCTAGGCTACAAAGAGCATTAGTGCAGTTTTTTCTTGATAA AAATACCGATGCAGGTTACTTAGAAGTAAATCCGCCGCATGTAGTAAATGAAGCCTCTGGTTATGGTACGGGGCAACTTC CTGATAAAGAGGGACAAATGTATTTTGTGAATGAGGATAATTTATATCTTATTCCTACAGCAGAAGTGCCTGTAACCAAT ATTTATAGAGATGTAATCTTGGAGGAAAAAAAACTTCCTGTAAAGAATACGGCTTTTTCTCAATGTTACAGAAGAGAAGC AGGAAGCTACGGTGCTGATGTGAGAGGACTTAACCGTCTTCATCAATTTGAAAAAGTAGAGATTGTAAGACTAGAAAAAC CTGAAAACTCTTACACTGCACTAGATGAGATGGTGGCTCATGTAAAATCTATTTTAGAGGATTTGGAATTGCCATTTAGA ATTTTGCGTTTATGTGGTGGTGATATGGGCTTTACTTCTGCACTTACTTACGATTTTGAGGTGTGGAGTGCGGCTCAACA GAGATGGTTGGAGGTATCTTCGGTGTCTAACTTTGAAAGTTTTCAAGCTAATAGATTAAAATGCAGATATAAATCAGGAG ATGATAAACCTCAGTTAGTACATACATTAAATGGTTCTGCGATGGCCTTACCTAGAGTAATGGCAGCACTTTTAGAGAAC AACCAAACGGAAGAAGGTGTTAAAATTCCAGAAAAGCTAAGAGCATATACAAGATTTGAGAGTATATAA Protein sequence : MLQVQFLREQKSRVLEGLKKRNFKELNLVDEAIATDDERKKIQYELDENLAQMNKISKEIGLLMKEGKKQEAEEAKTKTG EFKQKSQDLQQLLKEKEESLLNILYQIPNIPADIVKAGSSADDNEVVYQSCDTFEMGTEALPHWELAKKYNLIDFELGVK IAGAGFPVYLGKGARLQRALVQFFLDKNTDAGYLEVNPPHVVNEASGYGTGQLPDKEGQMYFVNEDNLYLIPTAEVPVTN IYRDVILEEKKLPVKNTAFSQCYRREAGSYGADVRGLNRLHQFEKVEIVRLEKPENSYTALDEMVAHVKSILEDLELPFR ILRLCGGDMGFTSALTYDFEVWSAAQQRWLEVSSVSNFESFQANRLKCRYKSGDDKPQLVHTLNGSAMALPRVMAALLEN NQTEEGVKIPEKLRAYTRFESI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-63 | 50 |
