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Name : Riean_0761 (Riean_0761) Accession : YP_004045431.1 Strain : Riemerella anatipestifer ATCC 11845 Genome accession: NC_014738 Putative virulence/resistance : Unknown Product : polysaccharide biosynthesis protein capd Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 817699 - 819624 bp Length : 1926 bp Strand : - Note : COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: fba:FIC_01947 capsular polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Putative UDP-GlcNAc-4,6-dehydratase; PFAM: Polysaccharide bio DNA sequence : ATGAACTTTAGTGAACTGAAAAATAAGATCTACGGAGGGGATAATATGATTAGTCTTTCTAATATTAGGTATTTGCCTAG ATGGATGGTACTTCTCATAGATGTTTTGTTTTTGATAGTTTCGCTTATGTTGTCCTATGGGGTGGTGGGTAAACTGTCTT CTGTAAGTTATCCCTATGTACTTAGTATTTACCAGAAGTATGCGGTTGTCTTAGGTGTAAATATCTTTTTTATGTTCTTG TTTCGTACTTACTCGGGGATTATTAGACATTCCACCTTTGTAGATTTATCTAAAATTTTATTAGCTAGTTTTTGCACAGT TTTTACTTTAGGTACAGTTACTTACATATATTTTTTCTTTTTTAAACAGAAATTACTACTGTTTCCCATCCTTCTGATAT ATTTCTGTATTTCTTTTACGGTTCTCTTTGTTTTTAGGTTGGTAGTGAAGGAAATTTTTCAATGGGCAAAAGAATACAGG AGAAGCTACTTAAGAAAAAAAATATTACTATTGGGAATAGGAGAAGAGTCGGTTGCTATTGCAAAAGCGGTGATGGGTAA TCCTTTTTTACCATACGAGGTCGTCGGGTTTATTACTGCTCGAAAGGATTCAAGGAAAGCCAAACTCTTGGGGAAGAGAA TTTATACCAGAGATTTTTTAGAAAAGACTACCAGAGAATATTTAGGTATAGATGGAGTTTTAATTGGTAGTAATACAGCC TCAATAGAGGAGATTGCAGAATGGGTTAATTTGTTTTTAGAGAAAGATTTAAAGGTATTTAAATCTCCGACCGTTCAAAA GTTGAGAAATGATGGGAGTAATATTAAAAATTTTCAAATAGAAGATTTACTTAATAGAAAGCCTATCGTTATAGAAAATG AGGAAGTAAAAAAGAGGCATCATCAAAAATCGGTTTTAGTAACAGGAGGAGCAGGTTCTATAGGGAGTGAAATAGTAAGG CAAGTAGCACAGTTTGAACCTTCGTTAATAGTTGTTCTAGACCAAGCGGAGACTCCTTTACATGAGATACAGTTGGAGGT GGAGGAAAACTACCCTGATATCAAGTTTGAATTTATACTGGCTGATATAACTAATAAGGAAAGATTAGAGTCGGTATTTA AAGAATATAATTTTTCTATGGTGTACCATGCGGCCGCCTATAAGCATGTTCCTTTGATAGAAAACAATCCGCATGAAGCC GCTCTAGTTAATATTCAAGGAAGTAAGAACTTGGCACTTTTGTCTAGTCGTTTTAAAGTTAATAGGTTTGTAATGGTCTC CACGGATAAGGCTGTTAATCCTACTAATGTAATGGGAGCCTCTAAAAGAGCTGCAGAGCTTTTTGTGCAAGCTCTTCAAA ATGAGGAAGATAATCAGACTAAATTTATTACCACTAGATTTGGTAATGTTTTAGGTTCTAACGGTTCTGTAATTCCTCAT TTTATAAAACAAATAGAGAAGGGTGGTCCAGTTACAATTACACATCCTGAAATAGTAAGGTATTTTGTGACCATTCCTGA AGCGTGTGAACTTGTTTTACAAGCAGGAACTATGGGAAAAGGAGGAGAAATATTTGTGTTTGATATGGGGGAATCTGTGA AGATACTCAATCTTGCGCGAAGAATGATTAAATTGTCTGGTCTAGAGCCAGATGTAGATATAAAAATTATTTATACAGGT CTAAGACCAGGGGAGAAACTGTATGAAGAACTTTTGAGTGATGATACAAAAACCCTTCCTACGTATCACGAGAAAATCAT GATTTCTAAGGACTCAGTTATGTTGTATGAAGAAATAGATGAATTAACATCTAGAATATATGAGAAAGCTAAAGGTAGAG ATAAAGTAGAGGTGGTTAGAATTTTGAAGGAGATAGTTAGAGAGTTTAGAAGTAATGACTCGGTATTTGAATGTTTGGAT AAATAG Protein sequence : MNFSELKNKIYGGDNMISLSNIRYLPRWMVLLIDVLFLIVSLMLSYGVVGKLSSVSYPYVLSIYQKYAVVLGVNIFFMFL FRTYSGIIRHSTFVDLSKILLASFCTVFTLGTVTYIYFFFFKQKLLLFPILLIYFCISFTVLFVFRLVVKEIFQWAKEYR RSYLRKKILLLGIGEESVAIAKAVMGNPFLPYEVVGFITARKDSRKAKLLGKRIYTRDFLEKTTREYLGIDGVLIGSNTA SIEEIAEWVNLFLEKDLKVFKSPTVQKLRNDGSNIKNFQIEDLLNRKPIVIENEEVKKRHHQKSVLVTGGAGSIGSEIVR QVAQFEPSLIVVLDQAETPLHEIQLEVEENYPDIKFEFILADITNKERLESVFKEYNFSMVYHAAAYKHVPLIENNPHEA ALVNIQGSKNLALLSSRFKVNRFVMVSTDKAVNPTNVMGASKRAAELFVQALQNEEDNQTKFITTRFGNVLGSNGSVIPH FIKQIEKGGPVTITHPEIVRYFVTIPEACELVLQAGTMGKGGEIFVFDMGESVKILNLARRMIKLSGLEPDVDIKIIYTG LRPGEKLYEELLSDDTKTLPTYHEKIMISKDSVMLYEEIDELTSRIYEKAKGRDKVEVVRILKEIVREFRSNDSVFECLD K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-72 | 41 |
