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Name : Riean_0588 (Riean_0588) Accession : YP_004045261.1 Strain : Riemerella anatipestifer ATCC 11845 Genome accession: NC_014738 Putative virulence/resistance : Unknown Product : tex-like protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 629297 - 631423 bp Length : 2127 bp Strand : + Note : COGs: COG2183 Transcriptional accessory protein; InterPro IPR003029: IPR018974: IPR006641: IPR003583; KEGG: fba:FIC_00898 RNA binding protein with S1 RNA-binding domain; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H DNA sequence : ATGACTCTAGTACAATATATACAGGCTCTATCGCAACTGCAACCCAAATCTATAGAAAACACACTAACTCTTCTTGCCGA AGGTGGAACTATTCCCTTTATTTCTCGCTACCGAAAAGATGCAACAGGCAACTTAGACGAAGTTGCCATAGAACAAATTC AGAAACTTCAAAAACAGTACGAGGAAATCGTCAAGAGAAAAGAAAGTATTTTAAAATCAATAGAAGAGCAGAATAGCCTT ACGCCTGAACTTCAACAAAAAATTGAACAATCATTTAGCCTACAAGAATTAGAAGATTTATATCTACCTTACAAAAAGAG AAGAAAAACTAAAGCGGATACTGCTAGAGAAAGCGGATTAGAGCCTTTGGCTAAAATCATTATGGCTCAAAACGCTAATC ACTTAGAACACACCGCACAAAAGTATATTTCTGATAAAATATCCACCGCCCAAGAATCCTTGGATGGAGCTTGTAATATT ATCGCAGAATGGATTAACGAAAATCTATTCATAAGAAAACGCCTAAGACAACTGTTTCAACGACAGGCTAAAATTACTAG TAAAATCACAAAAAAAGCCAAAGAAAACGAGGACGAAGCTCAGAAATATCAACAATATTTTGATTGGAGCGAAGTTTTAC TCAAAGCTCCCTCCCATAGGTTGTTAGCTCTATTAAGAGCAGAAAACGAGGGCTTCATCAAACTTAAAATTGAAATAGAT AATGATGAAGCAATTGATTTTATAGAAAAAAGCATCATTAAAAATAATAACGAAACTGCTCACTACATCAGCACCGCCAT AAAAGATGCCTATAAACGCCTTTTAGAACCTTCTATCGCTAACGAAATTTTACAAGAAGCCAAAAGCAAAGCAGATGATA AGGCCATTAGTATATTTTCGGAAAACCTTAAGCAACTGCTACTTGCCGCTCCACTCGGTGAAAAAAGAATTTTAGCCATA GACCCTGGCTACCGTACAGGTTGTAAAGTGGTGTGTTTAGATGAAAAGGGAGATTTGCTTTACAACGAAACTATTTACCC TCACGCTCCTCAAAATGAGACAGGAGTTGCAATGAAAAAAATCCGTAGTATGGTTAATGCTTACCAAGTAGAAGCCATCG CCATAGGAAATGGAACTGCGAGTAGAGAAACAGAAGCATTCATCAAAAAAATAGCCTTTGATAAAGATTTACAGGTGTTT GTAGTATCAGAAGCAGGTGCTTCAGTCTATTCGGCAAGCAAAATTGCTAGAGAAGAGTTTCCTAACTATGATATTACCGT TCGTGGGGCTGTATCCATCGGAAGACGACTTTCTGACCCATTAGCAGAACTTGTAAAAATAGACCCCAAAAGTATCGGAG TTGGGCAGTATCAGCACGATGTGGATAGCACCAAACTTAAAGAAGAGCTAGACAACACGGTAATCCACTGTGTAAATGCC GTAGGCGTTAACCTGAACACCGCTAGCCAATCTCTACTGAGCTATGTGTCTGGCATTGGAGAAAAAATAGCAGAGAATAT CGTAAAATATCGCTCGGAAAACGGGGCTTTTAGAACAAGAGCAGAACTGAAAAAAGTCCCTCGTTTGGGAGAAAAAGCAT TCCAACAAGCGGCAGCTTTTGTACGCATTAAAGACTCAGAAAACCCGTTAGACAATTCGGCTGTACACCCAGAATCTTAC GTTACTGTAGAAAAAATGGCTAAAGATTTAGGACTAAAAACCAAGGAGCTCATTGCCAACAAAGAGCAAATCCAAAAAAT AATCCCAGAGAAATATACGACTCCAGAAGTGGGAATTTTAGGAATTAAAGATATTTTAAAAGAATTAGAAAAACCAGGGT TAGACCCTCGCCAACAAGCTAAAGTATTTGAATTTAATCCTAATATTAAAACAATTGCCGATATAAAAGTAGGTCTGTCT CTACCTGGAATTGTAAACAATATTACGGCGTTTGGTTGCTTTGTTGATATTGGTATTAAGGAAAGTGGACTTATACATAT CTCCCAACTTACCGATGGTTTTGTATCTGATGTTAATGAGGTAGTAAAACTTCACCAAACTGTAGAAGTACAAGTTTTAG AAATAGACGAAGTACGAAAAAGGATTGGGCTAAAACTTATTAAGTAG Protein sequence : MTLVQYIQALSQLQPKSIENTLTLLAEGGTIPFISRYRKDATGNLDEVAIEQIQKLQKQYEEIVKRKESILKSIEEQNSL TPELQQKIEQSFSLQELEDLYLPYKKRRKTKADTARESGLEPLAKIIMAQNANHLEHTAQKYISDKISTAQESLDGACNI IAEWINENLFIRKRLRQLFQRQAKITSKITKKAKENEDEAQKYQQYFDWSEVLLKAPSHRLLALLRAENEGFIKLKIEID NDEAIDFIEKSIIKNNNETAHYISTAIKDAYKRLLEPSIANEILQEAKSKADDKAISIFSENLKQLLLAAPLGEKRILAI DPGYRTGCKVVCLDEKGDLLYNETIYPHAPQNETGVAMKKIRSMVNAYQVEAIAIGNGTASRETEAFIKKIAFDKDLQVF VVSEAGASVYSASKIAREEFPNYDITVRGAVSIGRRLSDPLAELVKIDPKSIGVGQYQHDVDSTKLKEELDNTVIHCVNA VGVNLNTASQSLLSYVSGIGEKIAENIVKYRSENGAFRTRAELKKVPRLGEKAFQQAAAFVRIKDSENPLDNSAVHPESY VTVEKMAKDLGLKTKELIANKEQIQKIIPEKYTTPEVGILGIKDILKELEKPGLDPRQQAKVFEFNPNIKTIADIKVGLS LPGIVNNITAFGCFVDIGIKESGLIHISQLTDGFVSDVNEVVKLHQTVEVQVLEIDEVRKRIGLKLIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 1e-131 | 45 |
