|
Name : Riean_0476 (Riean_0476) Accession : YP_004045150.1 Strain : Riemerella anatipestifer ATCC 11845 Genome accession: NC_014738 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 514485 - 515888 bp Length : 1404 bp Strand : - Note : COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027: IPR000815: IPR004099: IPR006258: IPR 012999; KEGG: fba:FIC_01592 dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase; PFAM: FAD DNA sequence : ATGAGTCAATTTGATGTTACTGTTATCGGTTCTGGACCTGGAGGTTATGTGGCAGCTATTCGTTGTGCACAATTAGGTTT TAAAACAGCTATTATAGAGAAATATCCTACCTTGGGAGGGACATGTCTTAATGTAGGGTGTATTCCGTCTAAGGCACTTT TGGATAGTTCAGAGCATTTTGAAAATGCTAAGCATAACTTTGCAAACCACGGAATTGTTATCAACGAGCCTAAAGCGGAT TTGGCTAGAATGGTAGAAAGAAAAAACGAAGTGGTAGAGCAAACGACCAAGGGGATTAATTTCCTAATGGACAAAAACAA AATTACAGTTTTTGAAGGAGTAGGAAGTTTTGAAACAGCAACTAAAATTAAAGTAATAAAAAATGATGGCTCTACAGAGT CTATTGAGTCCAAATATACCATTATAGCTACGGGGTCTAAGCCGTCTTCTTTGCCTTTCATTAGTTTAGATAAAGAAAGA ATCATAACTTCTACGGAGGCTCTTAATTTGAAAGAAATACCTAAGCACCTTATCGTAATCGGTGGTGGTGTTATAGGGCT AGAGCTTGGTTCTGTTTACAAAAGACTAGGTTCTGAGGTAACAGTGGTAGAGTATTTAGATAAAATTATCCCAGGAATGG ACGGTTCTTTGTCTAAAGAATTACAAAAAGTTCTTAAAAAACAAGGAATGAAATTTATGCTTTCTACAGCAGTTTCTGCG GTGGAAAGAAAAGGCGATGCCGTGGTAGTAACAGCTAAAGATAAGAAGGGGGCAGAAGTAAGTGTAGAGGGAGATTATTG CTTAGTATCAGTGGGAAGAAGACCTTATACGGAAGGTTTAGGCTTAGAGAATGCAGGTGTGGATTTAGATGAAAGAGGAA GAGTAAAAGTAAATGACCACCTTCAGACTAATGTATCTAATATCTATGCGATTGGTGATGTGGTTAAGGGAGCTATGTTG GCTCACAAGGCGGAAGAAGAAGGTGTTTTTGTAGCAGAAACTTTAGCAGGGCAAAAACCTCATATTAACTACAATCTAAT ACCAGGGGTGGTTTACACTTGGCCAGAAGTAGCTGGAGTAGGGAAGACAGAAGAGCAGCTTAAAGAAGAAGGCGTTTCTT ATAAAGTGGGAAGTTTCCCAATGAGAGCTTTGGGTAGAAGCCGTGCGAGTGGAGATATTGATGGACTAATTAAGGTATTG GCTGATGAAAAAACAGACGAAATTTTAGGAGTTCATATGATAGGAGCTCGTGCTGCGGATATGATTGCAGAAGCTGTAGT AGCTATGGAATTCCGTGCGAGTGCCGAAGATATTTCAAGAATTTCTCACGCTCACCCAACATTTACAGAAGCTATTAAAG AAGCGGCTTTAGATGCTACAGGAAAAAGAGCATTGCATATGTAA Protein sequence : MSQFDVTVIGSGPGGYVAAIRCAQLGFKTAIIEKYPTLGGTCLNVGCIPSKALLDSSEHFENAKHNFANHGIVINEPKAD LARMVERKNEVVEQTTKGINFLMDKNKITVFEGVGSFETATKIKVIKNDGSTESIESKYTIIATGSKPSSLPFISLDKER IITSTEALNLKEIPKHLIVIGGGVIGLELGSVYKRLGSEVTVVEYLDKIIPGMDGSLSKELQKVLKKQGMKFMLSTAVSA VERKGDAVVVTAKDKKGAEVSVEGDYCLVSVGRRPYTEGLGLENAGVDLDERGRVKVNDHLQTNVSNIYAIGDVVKGAML AHKAEEEGVFVAETLAGQKPHINYNLIPGVVYTWPEVAGVGKTEEQLKEEGVSYKVGSFPMRALGRSRASGDIDGLIKVL ADEKTDEILGVHMIGARAADMIAEAVVAMEFRASAEDISRISHAHPTFTEAIKEAALDATGKRALHM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 1e-67 | 44 |
