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Name : Riean_0253 (Riean_0253) Accession : YP_004044932.1 Strain : Riemerella anatipestifer ATCC 11845 Genome accession: NC_014738 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 277468 - 279168 bp Length : 1701 bp Strand : - Note : COGs: COG1190 Lysyl-tRNA synthetase (class II); InterPro IPR002313: IPR004365: IPR004364: IPR018149: IPR 006195; KEGG: fba:FIC_01499 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: DNA sequence : ATGATGCATTTATCAGAACAAGAAATTATCCGTAGAGAAAAGTTAGAAAAACTTTCTCAAATGGGCATAAATGCCTTTCC GGCAGACGAATATGCTATTACACATACCACACAATCTATAAAAGAAAATTTTCAAGAAGGAAGCAAGGTTAAAATCGCTG GTAGGCTAATGTCTAGAAGAATCCAGGGGAAAGCTTCTTTTGCCGAATTACAAGATAGCGAAGGCAGAATACAAGTGTAT TTTAATAGAGATGAAATTTGTCCTGAGGAAGACAAAACCCTTTATAACGAAGTTTATAAGCATCTTTTAGACATTGGAGA TATTATAGGCGTAGAGGGAGAATTGTTCAAAACTCAAGTAGGAGAAATGACGGTAATGGTTAAAAATTTCACTCTATTAA CCAAAACTCTTCGTCCACTTCCTCAACCAAGAACTGATGAAAATGGTGTGGTACACGATGCTTTTAACGACCCTGAACTT CGTTATAGACAGCGCTACGTGGATCTTACAGTAAACCCACATGTTAAAGAAATTTTTGTAAAAAGAACGAAATTGTTTAA CGCAATGCGTGGGTTCTTTAATGACGCTGGATATTTTGAGGTAGAAACGCCTATTTTACAGGCTATTCCAGGTGGAGCTT CAGCAAGACCATTCATTACACATCATAATGCCTTGGATATTCCACTATATATGAGAATTGCTAACGAGCTTTATCTTAAA AGACTTATCGTAGGCGGGTTTGATGGGGTGTATGAGTTCTCCAAAAACTTCCGTAACGAAGGTATGGACCGAACTCACAA CCCTGAGTTTACAGCCATGGAGATTTATGTGGCGTACAAGGATTACAACTGGATGATGGATTTTACCGAAAGACTGTTGG AGCATTGTGCTACTGCGGTGAATGGGAAACCTGAATCTCAGTTTGGCGAACATACCATCAATTGGAAAGCCCCTTACCCA AGAATTTCCATGACGGACGCCATTCGGAAATTTACGGGGTTTGATATTACGGGAAAAACCGAAGAGGAACTTAGAACCTT TGCCAAATCCATCGGTATTGAAGTGGATGACACGATGGGGAAAGGCAAGCTCATTGATGAAATTTTCGGAGAGAAGTGCG AAGGTAACTTTATTCAGCCGACCTTCATTACTGACTACCCTATCGAAATGTCGCCGCTTACTAAAAAGCACAGAAGCAAA GAGGGCTTAACCGAAAGATTTGAGTTGATGGTTTGTGGAAAAGAAATTGCGAATGCTTACTCTGAGCTTAACGACCCTAT TGACCAAAGAGAACGTTTTGAAGAGCAACTTAAACTTTCAGAAAAGGGTGATGACGAAGCGATGTTTATCGACCAAGATT TCCTAAGAGCTTTAGAATACGGTATGCCGCCTACGGCTGGTTTGGGTATCGGTATGGACAGGTTGGTGATGTTCTTAACG AATAATGCTTCTATTCAGGAGGTTTTATTCTTCCCTCAAATGAGACCAGAAAAGGCTCAGCCTAAAGTAGAGATTGGAGA AAATGAAGAAATTATCCTTGGTATTCTTAATAAAAACAACGGTAAAATGCTGATAGCTGACTTAAAAACTCAATCAGGCT TAAGTGGAAAGAAATGGGATAAGTCTTCTAAACTATTAGTTTCTAATAATTTAATTTCTCTAGTAACTGAAGGTGAGGAT AAATATTTCCAAATAGTTTAA Protein sequence : MMHLSEQEIIRREKLEKLSQMGINAFPADEYAITHTTQSIKENFQEGSKVKIAGRLMSRRIQGKASFAELQDSEGRIQVY FNRDEICPEEDKTLYNEVYKHLLDIGDIIGVEGELFKTQVGEMTVMVKNFTLLTKTLRPLPQPRTDENGVVHDAFNDPEL RYRQRYVDLTVNPHVKEIFVKRTKLFNAMRGFFNDAGYFEVETPILQAIPGGASARPFITHHNALDIPLYMRIANELYLK RLIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTERLLEHCATAVNGKPESQFGEHTINWKAPYP RISMTDAIRKFTGFDITGKTEEELRTFAKSIGIEVDDTMGKGKLIDEIFGEKCEGNFIQPTFITDYPIEMSPLTKKHRSK EGLTERFELMVCGKEIANAYSELNDPIDQRERFEEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTAGLGIGMDRLVMFLT NNASIQEVLFFPQMRPEKAQPKVEIGENEEIILGILNKNNGKMLIADLKTQSGLSGKKWDKSSKLLVSNNLISLVTEGED KYFQIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-101 | 44 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-82 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Riean_0253 | YP_004044932.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-102 | 44 |
