|
Name : Riean_1807 (Riean_1807) Accession : YP_004046468.1 Strain : Riemerella anatipestifer ATCC 11845 Genome accession: NC_014738 Putative virulence/resistance : Resistance Product : cation efflux protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1230 EC number : - Position : 1997796 - 1998593 bp Length : 798 bp Strand : + Note : COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524: IPR006121; KEGG: sat:SYN_03034 cobalt-zinc-cadmium resistance protein; PFAM: cation efflux protein; SPTR: Cation efflux protein; manually curated; PFAM: Cation efflux family DNA sequence : ATGCAGAAAACGACATTTAAAATATCAAAAATGGACTGCCCATCCGAAGAACAAATGATACGGATGAAACTTGCCGACTT GACAAACATCAACTCGTTGGACTTTGATATACCGAACAGACAACTGACCGTTTTTCACACTGACAATCACGACCAAATTT TTCAACGACTTGACAACTTAAAGTTTGACACTTCTCTTATTGACAGCGTTTCGGCAGACAATTACATTTCAACAACCGAC AACACAGACCGAGAAAAAAAATTACTTTGGCAAGTTTTAGCCATCAACTTTTTCTTTTTTGCACTTGAACTTGCGACAGG TTTTATTTCTAACTCAATGGGACTTGTAGCCGACAGTTTGGATATGCTTGCCGACAGTATTGTTTACGGACTTGCACTTT TTGCAGTTGGTGGGACAATGACACGAAAAAAGAACATTGCAAAATCGGCAGGTTATTTTCAGTTGACACTTGCGGTTTTT GGTTTTATAGAAGTTATCAGACGATTTGTTGGAACGGAAACAATTCCAGTATTTCAGACAATGATAATTATTTCAATTCT TGCTCTTATTGGAAACGGACTGTGTTTGTATTTACTGCAAAAAAGTAAAAGCAAAGAAGCACATATGCAAGCAAGTATGA TTTTCACATCTAATGACGTAATTGTAAACCTTGGAGTAATTGTAGCAGGCGGACTTGTTTACTTGACAAACTCAAAATAT CCTGACCTTATCGTTGGGACAATTGTATTTTTCATCGTTGGACAAGGAGCATTTAAAATCTTGAAACTATCAAAATGA Protein sequence : MQKTTFKISKMDCPSEEQMIRMKLADLTNINSLDFDIPNRQLTVFHTDNHDQIFQRLDNLKFDTSLIDSVSADNYISTTD NTDREKKLLWQVLAINFFFFALELATGFISNSMGLVADSLDMLADSIVYGLALFAVGGTMTRKKNIAKSAGYFQLTLAVF GFIEVIRRFVGTETIPVFQTMIIISILALIGNGLCLYLLQKSKSKEAHMQASMIFTSNDVIVNLGVIVAGGLVYLTNSKY PDLIVGTIVFFIVGQGAFKILKLSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | AGK36654.1 | Co/Zn/Cd efflux system component | Not tested | AbaR26 | Protein | 1e-48 | 44 |
| ACICU_00235 | YP_001844894.1 | heavy metal detoxification protein | Not tested | AbaR20 | Protein | 1e-48 | 44 |
| cadA | ACN81030.1 | Co/Zn/Cd efflux system component | Not tested | AbaR5 | Protein | 1e-48 | 44 |
| cadA | ACS32042.1 | Co/Zn/Cd efflux system component | Not tested | AbaR5 | Protein | 1e-48 | 44 |
| 1_43 | CAJ77022.1 | Heavy metal detoxification protein | Not tested | AbaR1 | Protein | 1e-48 | 44 |
| 1_376 | CAJ77095.1 | Heavy metal detoxification protein | Not tested | AbaR1 | Protein | 1e-48 | 44 |
| cadA | ADZ05770.1 | Co/Zn/Cd efflux system component | Not tested | AbaR11 | Protein | 1e-48 | 44 |
