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Name : Riean_1173 (Riean_1173) Accession : YP_004045839.1 Strain : Riemerella anatipestifer ATCC 11845 Genome accession: NC_014738 Putative virulence/resistance : Virulence Product : ATPase AAA-2 domain-containing protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1287207 - 1289714 bp Length : 2508 bp Strand : + Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterPro IPR001270: IPR018368: IPR004176: IPR003959: IPR 013093: IPR019489: IPR003593; KEGG: fba:FIC_02526 ATP-dependent Clp protease, ATP-binding subunit ClpC; PFAM: ATPase AAA-2 domain pr DNA sequence : ATGATGAGTAATAAATTTTCGGGAGGATTGGATAAAGTCCTCAAAGCGAGTGCTAAAGAAGCAAAAAGATTAGAAAGTGA ATTTCTTAATACCGAACACCTTCTTTTAGGGATTATTAAAACAGATAATTCTGCGAGGGAAATATTACAGAATTTACAGG TAGATTTAACCCAAATAAGACGAAAGATAGAAGCTTTAAACTCTTTAAGTTCTAATGTTTTTCCACCGAAAGAAATGGAG GTAATTCCATTTACTAAAATGGCAGATTATGCACTTAAAAGAGCTGATTTGGAAAGTAAAAGTTACCGTTCAGAACATAT CAATACGGTTCACTTGCTATTGGGTATTCTTTACAAAATGGAAGACCCTACCACTCAGATTCTAGAAAGTTATGATGTAG ATTATGAGGCGGTTACTAAAGAGTATCGCACGATGTTAGAGCAGAACGGGATTTCGCCTAAAATGAGTAGTGAGTATGAT GATAGTAATGAGGAAAGAGAAAGCTTTGGGCAACCTAATAAATCAAGTAGCAGTATCGGAACTGCAAAAAGTAAAACACC TACCTTGGATAATTTCGGTAGAGATTTAACGGCTTTGGCTAAGGAAGGAAGGTTAGACCCAGTAATTGGTAGGGAAAAAG AGATAGAACGAGTATCACAAATTCTGTCCAGAAGAAAGAAAAATAATCCACTCCTTATTGGAGAGCCAGGTGTGGGGAAA TCTGCTATTGCAGAGGGGTTAGCATTAAGGATACATCAGAAAAGAGTTTCTCGTGTATTGTACAACAAGCGTGTAATTAC TTTAGATTTAGCAAGTTTGGTTGCGGGTACAAAGTACAGAGGTCAGTTTGAGGAAAGAATGAAAGCAATTATGACAGAAC TAGAAAAAAATAGAGATGTCATTTTGTTCATAGACGAGTTGCATACTATTGTAGGGGCGGGAGGTTCTACGGGAAGTTTA GATGCGTCTAATATGTTCAAACCTGCTTTGGCAAGGGGAGAAATACAATGCATTGGAGCTACTACTTTAGATGAGTACAG ACAGCATATAGAGAAAGATGGTGCTTTGGAGAGACGTTTCCAAAAAGTAATGGTAGAGCCGACTTCCATAGAAGAAACCA TTCAGATTTTGTATCAAATTAAAGATAAGTACGAAGAACATCACAATGTAATTTATACAGATGACGCTATCAAGGCTTGT GTTAATCTTACCTCTAGATACATCACAGATAGATTTTTACCAGATAAAGCCATAGATGCTATGGACGAAGCGGGTTCTAG GGTTTACATTAAAAATATGAAAGTCCCTACCGAACTTGTAGATTTTGAAGCCAAAATAGAAGAAGTTAAAGACCTTAAAC AAAAAGCGGTTAAAGCTCAAGATTACCTAGAAGCGAGAAGGCTTAAAGATGAAGAAGAGCGTTTACAAATAGAACTTAAT TTGGTTCAGGAAGAATGGGATAGAAATGTAAAAGAGATGAAAGAAACGGTTACGGAGGAGAATGTCGCAGAAGTAGTATC AATGATGAGTGGTGTTCCTGTAACTAAAGTTGGCAAAAACGAACTTGATAAACTTGCCGAAATGGACAAAAACCTTAATG GTAAGGTAATTGGTCAAGAAGAAGCCGTTAAAAAAGTAGTGAAATCTATCCAAAGAAATAGAACAGGACTAAAAGACCCT AACCGTCCTATTGGTACTTTTATTTTCCTAGGAACAACAGGAGTTGGTAAAACAGAGCTAGCTAAAGTGATGGCTAAGGA ATTATTCAACTCCGAAGATGCACTCATAAGAATAGATATGAGCGAATATATGGAGAAATTTGCGGTGTCTAGACTTGTAG GGGCGCCTCCAGGATATGTGGGGTATGAAGAAGGCGGACAACTTACAGAAGCCGTTAGAAGAAAGCCTTATTCGGTAGTG CTTTTAGATGAGATAGAAAAAGCTCACTCTGATGTGTTTAACCTATTGTTGCAGATTTTAGATGAAGGTTTCGTAACCGA TAGTTTGGGTAGAAAAATAGACTTTAGAAATACGATTGTTATTTTGACCTCTAACATTGGTACTCGTCAACTGAAAGATT TTGGTGATGGTGTAGGCTTCGGAACTTCAGCGAAAAAATCTAGTACCGATGCCCACGCAAGAAGTACGATAGAGTCGGCT CTTAAAAAAGCATTTGCTCCGGAGTTTTTAAATAGAATAGATGATATTATTATTTTCAACGCTTTAGAGAAAGAAGATAT TAAGAAAATTATAGATTTAGAACTTAATAAACTTTACCAAAGATTAAGCAAACTAGGTTATACCGTAAGTCTTACAGAGG AAGCCAAGGACTTTATTGCTGAGAAAGGTTGGGATAAAGACTTCGGTGCTAGACCACTGAAAAGAGCGGTACAAAAGTAC ATAGAAGATTTACTAGCCGAGCTTTTGGTAACCAAACAATTAAGCGAAGGCGAAAGTGTAGTCTTAAAATTAAATGAAGC TAAAGACGCTTTAGAAAAACAAAATTAA Protein sequence : MMSNKFSGGLDKVLKASAKEAKRLESEFLNTEHLLLGIIKTDNSAREILQNLQVDLTQIRRKIEALNSLSSNVFPPKEME VIPFTKMADYALKRADLESKSYRSEHINTVHLLLGILYKMEDPTTQILESYDVDYEAVTKEYRTMLEQNGISPKMSSEYD DSNEERESFGQPNKSSSSIGTAKSKTPTLDNFGRDLTALAKEGRLDPVIGREKEIERVSQILSRRKKNNPLLIGEPGVGK SAIAEGLALRIHQKRVSRVLYNKRVITLDLASLVAGTKYRGQFEERMKAIMTELEKNRDVILFIDELHTIVGAGGSTGSL DASNMFKPALARGEIQCIGATTLDEYRQHIEKDGALERRFQKVMVEPTSIEETIQILYQIKDKYEEHHNVIYTDDAIKAC VNLTSRYITDRFLPDKAIDAMDEAGSRVYIKNMKVPTELVDFEAKIEEVKDLKQKAVKAQDYLEARRLKDEEERLQIELN LVQEEWDRNVKEMKETVTEENVAEVVSMMSGVPVTKVGKNELDKLAEMDKNLNGKVIGQEEAVKKVVKSIQRNRTGLKDP NRPIGTFIFLGTTGVGKTELAKVMAKELFNSEDALIRIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTEAVRRKPYSVV LLDEIEKAHSDVFNLLLQILDEGFVTDSLGRKIDFRNTIVILTSNIGTRQLKDFGDGVGFGTSAKKSSTDAHARSTIESA LKKAFAPEFLNRIDDIIIFNALEKEDIKKIIDLELNKLYQRLSKLGYTVSLTEEAKDFIAEKGWDKDFGARPLKRAVQKY IEDLLAELLVTKQLSEGESVVLKLNEAKDALEKQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 7e-168 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Riean_1173 | YP_004045839.1 | ATPase AAA-2 domain-containing protein | VFG0080 | Protein | 4e-150 | 51 |
| Riean_1173 | YP_004045839.1 | ATPase AAA-2 domain-containing protein | VFG0079 | Protein | 0.0 | 48 |
