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Name : Riean_1028 (Riean_1028) Accession : YP_004045695.1 Strain : Riemerella anatipestifer ATCC 11845 Genome accession: NC_014738 Putative virulence/resistance : Unknown Product : ssra-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 1116080 - 1116538 bp Length : 459 bp Strand : - Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR000037: IPR020081; KEGG: fba:FIC_02058 tmRNA-binding protein SmpB; PFAM: SmpB protein; SPTR: SsrA-binding protein SmpB; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGAATATTCAGAGGACAGTCAGTATTTCTAATAAGAGAGCTCGTTTTGAGTATGAAATTTTAGAACAAGTTGAAGCTGG AATAGTTTTAACAGGGACAGAAATTAAAGCTTTGAGATCTTCTAAAGCGTCCATTACAGAAAGTTTTTGTCAATTTATAG AAGGGGAGCTCTATGTTATCAATATGACGATAGATGAATATAAATTAGGGACTTTCTATAATCATAAAATAAAGCGAGAA CGAAAATTGCTTCTTCACAAAAGAGAGTTGGATAAGTGGAGTAAGAAGATGAAAGATGTGGGTAATACCATAGTGCCATT GAAGGTTTATATCAATGATAGAGGTAAAGCTAAAGTTTTGATTGCATTAGCAAGAGGTAAAAAACTTTACGATAAAAGAG AAGCGATTAAGGAGAGAGAAGCAAAAGTTAAATTGAATCGCGTATTCAAAAAAAACTAA Protein sequence : MNIQRTVSISNKRARFEYEILEQVEAGIVLTGTEIKALRSSKASITESFCQFIEGELYVINMTIDEYKLGTFYNHKIKRE RKLLLHKRELDKWSKKMKDVGNTIVPLKVYINDRGKAKVLIALARGKKLYDKREAIKEREAKVKLNRVFKKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 1e-20 | 48 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 3e-17 | 48 |
